Collimonas fungivorans: CFU_0798
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Entry
CFU_0798 CDS
T01583
Symbol
phrB
Name
(GenBank) Deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
cfu
Collimonas fungivorans
Brite
KEGG Orthology (KO) [BR:
cfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cfu03400
]
CFU_0798 (phrB)
Enzymes [BR:
cfu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CFU_0798 (phrB)
DNA repair and recombination proteins [BR:
cfu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CFU_0798 (phrB)
Prokaryotic type
CFU_0798 (phrB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AEK60632
UniProt:
G0AI49
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Position
complement(937879..939411)
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AA seq
510 aa
AA seq
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MPHNHSFFVYIIALMPQFEKSLVWFRRDLRMSDHAALHHALKNSAAVFCVFVFDTDILQP
LLDAGLGADRRVEFIRGSVTELDLELRKLGGGLLVRHGPAHDVIPALARQLGVNAVFSNH
DYEPQARQRDAGVARTLAADGRAWHSYKDQVIFECEEVLTMAGQPFSVFTPYKNAWMKRL
AAADGSFFLKPYPIEKYAARLAPPPSSPPEKIPSLAALGFKKTNLRELKIAPGMSGACGL
LEDFMPRLGQYGQSRDFPAVKGPSYLSIHLRFGTISIRTLARLAYQALHQGAAAGGAAIW
LSELIWRDFYFMILHHHPHVAGAAFKPEYDAIRWESGERAHSLFLAWCDGRTGYPLVDAA
MLQLNQSGYMHNRLRMVTASFLIKDLGIDWRWGERYFAERLNDFDLAANNGGWQWAASSG
CDAQPYFRIFNPITQSEKFDADGKFIRRYLPQLSALGDRHIHAPWLAPAQELERAGIRLG
QDYPLPLVQHDEARKATLQRYAVVKTVNAE
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
ttgcctcacaatcattcattttttgtatacatcattgccctcatgccgcaatttgagaaa
tccctggtctggtttcgtcgcgatttacgcatgtccgatcatgcggccctgcaccatgca
ttaaaaaacagcgcggcggtattctgcgtattcgtgttcgacaccgatatcctgcagcca
ttgctggatgccggcctaggcgccgatcgccgggtcgaattcatccgcggcagcgtgacc
gagctcgacctcgagctgcgcaaactgggcggcggactgctggtgcgccatggtcccgcc
cacgatgtcatccctgcgctagcacggcagcttggcgtcaatgccgtgttcagcaaccac
gattacgaaccgcaggcacggcagcgcgatgccggcgtcgccagaacactggccgccgat
ggccgtgcctggcacagttacaaggaccaggtgatttttgaatgcgaggaagtgttgacc
atggccggccagccgttttctgtattcacgccctacaagaatgcctggatgaaaaggctg
gctgcagcagatggctcgtttttcctgaaaccctacccgatagaaaaatatgcggcgcgt
cttgcgccgccgccttcctcgccacccgaaaagatacccagcctggccgcgctaggcttc
aagaaaaccaacctgagagagctgaagatcgcgccaggcatgtctggcgcctgcggtctg
ctggaggacttcatgccgcgtctaggacaatacggccagagccgcgatttcccggccgtc
aagggaccatcgtatctttcaatacacctgcgcttcggcactatttcgattcgtacgctg
gcccgcctggcttaccaggcgctacaccagggcgcggcggccggcggcgccgcaatatgg
ctgtcggaactgatctggcgcgacttttacttcatgatcctgcatcatcatccgcatgta
gcaggagctgctttcaagccggaatacgacgctatccgatgggaaagcggtgagcgagca
cacagcctgttcctggcttggtgcgatggccgcaccggctatccgctggtcgatgccgcc
atgctgcaactcaatcagagcggctatatgcacaatcgcctgcgcatggtgacggcgtcg
ttcctgatcaaggatctcggcatcgattggcgctggggcgaacgctactttgccgagcgc
ctcaacgatttcgatctcgccgccaataacggcggctggcaatgggctgcttcgtcgggt
tgcgatgcgcaaccctatttccgcattttcaatcccattacccagtctgaaaaattcgat
gccgacggcaagttcatccgccgctacctgccgcaattgtccgctctcggcgacagacat
atccacgcgccttggctggcgcccgcgcaagagctggaacgagccggaatcaggctggga
caggactatccgctcccgctggtgcagcacgatgaggcacgcaaggcaaccttgcagcgt
tatgcggtggtgaagacagtgaatgcggagtaa
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