Collimonas fungivorans: CFU_1772
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Entry
CFU_1772 CDS
T01583
Symbol
rluD
Name
(GenBank) Ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
cfu
Collimonas fungivorans
Brite
KEGG Orthology (KO) [BR:
cfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cfu03009
]
CFU_1772 (rluD)
Enzymes [BR:
cfu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
CFU_1772 (rluD)
Ribosome biogenesis [BR:
cfu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CFU_1772 (rluD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF6170
Motif
Other DBs
NCBI-ProteinID:
AEK61604
UniProt:
G0ABN8
LinkDB
All DBs
Position
2093087..2094139
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AA seq
350 aa
AA seq
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MGLQVMSFTKPNLAESLPDADLEADIDYVDDGVDDGDAATASAPIVLQLTPDVCGTRLDK
VVSTLVPQYSRSRIQQWIEAGHVTVDGKPGTTKMTTYGDETVVVLPQPAPDEKAFTPEDM
ALDVVYEDAAIIVINKPAGLVVHPAAGNWSGTLLNGLLFRWPALAGVPRAGIVHRLDKDT
SGLMVVAKTLEAQTDLVRQLQARTVKRQYLALVWGTPQLNGTVDSPMARHPRDRIKMAVS
ESLIAKPAITHYQRLATGLLERRPVSLMSCRLETGRTHQIRVHMQSLGFSLVGDALYGKQ
HLMPAFPRQALQASRLGLIHPSSGKACEWYAPLPEDFAALLVRAGMSVPE
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgggacttcaagtgatgtcatttaccaagccaaatttggctgaaagtctgcctgacgct
gatttagaggccgatatcgactacgtcgatgacggcgtcgacgatggcgacgcggctacc
gccagcgcgccgatagtactgcaattgactccggatgtctgcggtacgcgtctggataaa
gtggtttcgaccctggtgccgcaatattcgcgcagccgcatccagcagtggatagaagcc
ggccacgtcaccgtcgacggcaagccgggcaccaccaaaatgaccacctacggcgatgaa
accgtggtggtgctgccgcagccggcgcccgatgaaaaggcgttcacgccggaagacatg
gcgctggacgtggtctacgaagatgcggcaatcattgtcatcaacaagccggccgggctg
gtggtgcatccggccgccggcaactggtcgggcaccctgctcaacggcctgctgtttcgc
tggccggcattggccggggtgccgcgcgccggcatcgtgcatcgcctggacaaggatacc
agcggcctgatggtggtcgccaagacgctcgaagcgcagaccgatctggtgcgccagctg
caggcccgcaccgtcaagcgccagtacctggcgctggtgtggggcacgccgcagctgaac
ggcaccgtcgacagcccgatggcgcgccatccgcgcgaccgcatcaagatggcggtatcg
gaaagcctgatcgccaagccggccatcacccactaccagcggctggcgaccggcttgctg
gagcggcgtccggtcagcctcatgagttgtcgcctggaaactgggcgtacccaccagatt
cgcgtccacatgcagtcgctcggcttttcgctggtgggcgacgccttgtacggcaagcaa
catctgatgccggctttcccgcgccaggccctgcaggcatcgcgcctgggcctgatccat
ccgagcagcggcaaggcttgcgaatggtatgcgccgctgcctgaggatttcgccgcgctg
ctggtgcgtgcgggcatgagcgtgccggaataa
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