Cyanobium gracile: Cyagr_0907
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Entry
Cyagr_0907 CDS
T02359
Name
(GenBank) exonuclease V gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
cgc
Cyanobium gracile
Pathway
cgc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cgc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Cyagr_0907
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgc03400
]
Cyagr_0907
Enzymes [BR:
cgc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Cyagr_0907
DNA repair and recombination proteins [BR:
cgc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Cyagr_0907
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
eRF1_3
Motif
Other DBs
NCBI-ProteinID:
AFY28089
UniProt:
K9P699
LinkDB
All DBs
Position
904204..907485
Genome browser
AA seq
1093 aa
AA seq
DB search
MLTVFRSNRAEFLARLLATQLRLHPPDPFEQVQVVVNTWPTSRWLGEQLAEHLGGIAANL
RFPFPGSHLRQLVDQLLVPVGEIPTAGAVDPWRADRLVWPLLGLLPAVAAEAEGEPLRRW
LAGRGAAAQLELGHWQLGRAIADAFDDYALYRPELLRAWEGGQAIDGHGRPLPDSQLWQP
LLYRALGAELGAEPFGRRVQELIARLRRGGPCPEAGGAPLRLFGLSSMAPIQVQLLQALS
RHRTVDLYLLTPCRDLWQRCGERRQELSDALALRQPLDAAWLLEAPGLEARFGRLGGEFQ
QLLEGTGEAQLGEEQDRDLFFAAAAGTTRPPLLAQLQEQLADADRIPSLAMDPEDHSLEF
HPCPGRLRQVQIVRDRLLQLLAADPGLEPRDILVMTPDIDGFAPLVASVFGDAHATGVAL
PWRLTDRSQQDGAGMASTLLLLLELAGTRLTATGLETLLGCRPLLERFGLELAEAARLVE
ALQEAGFRWGLDGQEKDPPSHSLAWTIDRLLLGLVLPADPGLAPGETAPWEAVVPLELAG
RWLHLLGRLRHWLGELRRGGTVSDWAERLRRLIDDLFGATGDDADERPELMGAIDAWQTA
AGACALSLEAPVAAAALRELLGAESGRFGHRSGALTISALEPMRAIPYRVIVLMGLDAGL
FPRPGDRPAFHLMEGQRQLGDPHPADQDRYVLMEALLSARDHLLLSWSCRDDRTGAALPP
SGPVGQWLQWLAGQLDAEAMGRLLVEHAANPLDRRNFLPAGGREAPSCDRRLLEAVRCLA
GERPVPPAALLAGASPQEAPPDGDGEAYAELRDWLVAPQKHWLRSLGLRPGEWEKRVDDL
EALALGERERSSLLRETLQRSEGEPGGEAPRSAADWLERHRGQGLLPPGAAGPLEAQLLQ
RRWTGLVNALEALGPPRRPSHHLGPWQAAIPWRGDAVVLAHTAQARVSHRLELWLQLLLA
SAAGAAPSRGVLIARDGDGYGPVLVLTAPDPVAARDELERLAGLERQWRSRGWPVPPETG
WSHVAGERKKPGQGRAKAAGTWEGSGFHAGERNRAEMEACFGPGLAADDLLTPEVLALAT
DLFSPLLAAEVVR
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
ttgctgacggtctttcgcagcaaccgggccgagttcctggcccgcctgctggccacccag
ctgcgtctccacccgcccgacccgttcgagcaggtccaggtggtcgtcaacacctggccc
accagccgctggctcggcgagcagctggccgagcacctcggcggtatcgccgccaacctg
cgctttcccttccccgggagccacctgcgccagctggtcgaccagctgctggtccccgtc
ggggagatccccacggcgggggccgtcgatccctggcgtgccgaccgtctcgtctggccc
ctgctgggcctgctgccggcggtcgccgccgaagcggaaggggagccgctgcgtcgctgg
ctcgcgggcaggggggcggcagcccagctggaactgggccactggcagctggggcgggcc
atcgccgatgccttcgacgactacgccctctaccggcccgagctgctgcgggcctgggag
ggcgggcaggcgatcgatggtcacggccggccgctgcccgacagccagctctggcagccc
ctcctctaccgcgccctgggggcggaactgggtgccgaaccgttcggacgccgggtgcag
gagctgatcgcccgactgcgccgcggcggcccctgccccgaagcgggcggcgcccccctg
cgactcttcggcctgagcagcatggcgccgatccaggtgcagctcctgcaggccctcagc
cggcaccggaccgtggacctctacctgctgacgccgtgccgcgatctctggcagcgctgc
ggtgagcgccgccaggagctgagcgacgccctggccctgcgccagccgctcgacgccgcc
tggctgctggaggccccgggactggaggcccgcttcggccgcctggggggagagttccag
cagctgctcgagggcaccggcgaggcccagcttggggaggagcaggaccgcgacctcttc
ttcgcggccgccgccggcaccacccggccccccctgctggcccagctgcaggagcagctg
gccgacgcggaccgcatcccgtccctggccatggatccggaggatcactccctggagttc
cacccctgtcccggccggctgcgccaggtgcagatcgtgcgcgaccgcctgctgcagctc
ctggcggccgaccccggcctcgaaccgcgggacatcctggtgatgacgcccgacatcgac
ggattcgcccccctggtggcctcggtgttcggcgacgcccacgccacgggcgtggcactc
ccctggcgcctcaccgaccgcagccagcaggacggggcggggatggccagcaccctgctg
ctgttgctggagctggccggcacccggctgaccgccaccggcctggagaccctgctgggc
tgccggcccctgctggagcggttcggcctcgagctggccgaggcggcccgcctggtggag
gcgctgcaggaggcgggtttccgctggggtctggacggccaggagaaggacccgccctcc
cacagcctggcctggacgatcgatcggctgctgctcggcctggtgctgcccgccgacccg
ggcctggcgcccggggagaccgccccctgggaggcggtggtgcccctggagctggccggc
cgctggctgcacctgctggggcggctgcgccactggctcggggaactgcggcggggcggc
acggtcagcgactgggcggagcggctgcggcggctgatcgatgacctcttcggggccacg
ggcgacgacgccgacgagcggcccgagctgatgggggccatcgacgcctggcagacggcc
gccggtgcctgcgccctgtccctggaggcaccggtggcggcggccgcgctgcgggaactg
ctcggggccgagagcggccgcttcggccaccgcagcggcgctctcaccatcagtgccctc
gaaccgatgcgggccatcccctaccgggtgatcgtgctgatgggactggatgcgggcctg
tttccccggcccggcgaccggcccgccttccatctgatggagggccagcggcagctcggc
gatccccaccccgccgaccaggaccgctacgtgctgatggaggccctgctctccgcccgg
gaccacctgctgctgagctggagctgccgcgacgaccgcaccggcgccgccctgcccccc
tccggcccggtgggccagtggctgcagtggctggccggccagctggatgcggaggccatg
gggcggctgctggtggagcacgccgccaaccccctcgaccggcgcaacttcctgcccgca
ggcgggcgggaagcccccagctgcgacaggcggctgctggaggcggtgcgctgcctggcc
ggcgaacggccggtgccgcccgcggcgctgctggccggagcgtccccccaggaggctccc
cccgacggcgacggcgaggcctacgccgaactgcgggactggctggtggcgccccagaag
cactggctgcggtccctggggctgcggccaggggagtgggagaagcgggtcgacgacctc
gaggccctggccctgggggagagggagcgctcctccctgttgcgggagaccctgcagcgc
agcgaaggggagcccggcggagaggccccccggtcggccgccgactggctggaacggcac
cgggggcagggcctgctgccgcccggggcggcgggccccctggaggcgcagctcctgcag
cgccgctggacgggcctggtgaacgccctggaggccctcggcccgccccggcgccccagc
caccacttgggcccctggcaggccgcgatcccctggcggggcgacgccgtcgtgctggcc
cacacggcccaggcccgggtcagccaccggctggaactctggctccagctcctgctggcc
agcgccgccggtgccgccccgagccggggggtgctgatcgcccgggacggcgatggctat
gggccggtgctggtgctcaccgcaccggaccctgtggcggcacgggatgaactggagcgt
ctggccgggctggagcggcagtggcgcagccggggatggccggtgccgccggaaacgggc
tggagccatgtggcgggcgagcgcaagaaacccggccagggacgggccaaggctgccggc
acctgggagggctccggtttccacgccggcgagcggaatcgggccgagatggaggcctgc
ttcggccccggcctggcggcggacgatctgctgacgccggaagtcctggccctggccacc
gacctcttctcccccctgctggcggcggaggtggtgcgatga
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