Cricetulus griseus (Chinese hamster): 100767593
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Entry
100767593 CDS
T02813
Symbol
Ifih1
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1 isoform X1
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge04622
RIG-I-like receptor signaling pathway
cge05161
Hepatitis B
cge05162
Measles
cge05164
Influenza A
cge05168
Herpes simplex virus 1 infection
cge05171
Coronavirus disease - COVID-19
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
100767593 (Ifih1)
09160 Human Diseases
09172 Infectious disease: viral
05161 Hepatitis B
100767593 (Ifih1)
05171 Coronavirus disease - COVID-19
100767593 (Ifih1)
05164 Influenza A
100767593 (Ifih1)
05162 Measles
100767593 (Ifih1)
05168 Herpes simplex virus 1 infection
100767593 (Ifih1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cge04054
]
100767593 (Ifih1)
Enzymes [BR:
cge01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100767593 (Ifih1)
Pattern recognition receptors [BR:
cge04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
100767593 (Ifih1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARD_2
RIG-I_C-RD
RIG-I_C
ResIII
Helicase_C
DEAD
CARD
SNF2-rel_dom
SWI2_SNF2
DUF3638
Acyl-CoA_ox_N
AAA_19
MoCF_biosynth
Motif
Other DBs
NCBI-GeneID:
100767593
NCBI-ProteinID:
XP_027276116
UniProt:
A0A9J7JR19
LinkDB
All DBs
Position
6:112259191..112312611
Genome browser
AA seq
1022 aa
AA seq
DB search
MSNVCSTEDSFCYLISIFRSRLKKCFEVEPVLDYLTFLPTETKEQILKKAATCGNTSAAE
LLLSTLEKREWQPGWTQIFVEALEHSGSHLAARYVRLTDLPSPSIETAHDECLHLLNLLQ
PTLVDKLLINDVLDTCMEKGLLTPEDRNRISGAGNAGNESGVRELLRRIVHKENWFSTFL
DVLRQTGNDALCQELTGAGCPEDIAELENLYQEDGPEAHEPVLCALDESSLETEAGDTEN
SSPETSFADCSVTSESDTSLAAGSVSCLDESLGHNSNMGSDSGIMGSDSDESTGTQRASP
DPELQLRPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYITKDHLDKKKQASEPGKVMVL
VNKVMLAEQLFRKEFNPFLKKWYRIIGLSGDTQLKISFPEVVKSYDVIISTAQILENSLL
NLESGEDDGVQLSDFSLIIIDECHHTNKEAVYNNIMRRYLKQKLKNNKLKKQNKPVVHLP
QILGLTASPGVGGAKKQAEAEKHILNICANLDAFTIKTVKENLGQLKHQIKEPCKKFVIA
DDTRENPFKEKLLEIMTSIQTYCQMSPMSDFGTQPYEQWAILMEKKAAKSGNRKNRVCAE
HLRKYNEALQINDTIRMIDAYSHLETFYSDEKEKKLAVLEDSDESEDDASGHAEELKDNV
KKSLKLDETDEFLMNLFFDNKKMLKKLAENPKYENEKLIKLRKTILEQFTKTEESSRGII
FTKTRQSTYALSQWITENEKFAEVGVKAHHLIGAGHSSEVKPMTQNEQKEVISKFRTGKI
NLLIATTVAEEGLDIKECNIVIRYGLVTNEIAMVQARGRARADESTYVLVTSSGSGVTER
EIVNDFREKMMYKAINRVQNMKPDEYAREILALQVQSILEKKMKVKRSIAKHYINNPSLI
TLLCKNCSMLVCSGENIHVIEKMHHVNMTQEFKRLYIVRENKALQKKFADYQANGEIICK
CGQAWGTMMVHKGLDLPCLKIRNFVVEFKNNSSKKQYKKWVELPVRFPDLDCSEYCLCSD
ED
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatgtctgttctacagaggacagcttctgctacctcatctcaatcttcaggagc
aggttgaaaaagtgctttgaggtggagcctgtgctggactacttgacctttctgcccaca
gaaaccaaagagcagattctgaagaaggcagccacctgtgggaacaccagcgctgcggaa
ctgctgctgagcactttggagaagagggagtggcagcctggctggacgcagattttcgtg
gaggccctggagcacagtggcagccacctagccgcgcgctacgtcagactcaccgatctg
ccctctccctccattgagacggcccatgatgaatgtctccacctgctaaatctccttcag
cccactctggtggataagctcctgattaacgatgtcttggatacttgcatggagaaggga
ctgctgacacctgaggacagaaatcggatttctggtgcaggaaatgctgggaatgagtca
ggtgtaagagagctgttgagaaggatcgtgcacaaagaaaactggttttctaccttcctg
gatgttcttcgccaaactggaaatgatgcactctgccaagagctaacaggtgctggctgc
cctgaagacattgcagagttggagaatttgtatcaggaagatggacctgaagctcatgag
cctgttctgtgtgctctagatgagtcaagtctggagacagaggctggggacacagagaat
tcttcaccagagacctcctttgcagactgctctgtgacctcagagtcagacacaagtttg
gcagcagggagtgtcagctgcttagacgaaagtcttggacataacagcaacatgggcagt
gattcaggcatcatgggaagtgattcagatgaaagtacagggacacaaagagcatccccc
gacccagaactgcagctcagaccttaccaaatggaagtggcccaaccagctttggaaggg
aagaatattatcatctgccttcccacggggagtgggaagaccagagtggctgtttacatc
accaaagatcacttagacaagaagaagcaggcttctgagcccgggaaggttatggtcctt
gtcaataaggtgatgttagctgagcaacttttccgcaaagagttcaacccatttttgaag
aaatggtatcgcattattggattaagtggtgacacccagctgaaaatatcgtttccagaa
gttgtcaagtcttatgacgttatcatcagcacagctcagatcctggagaattccctccta
aatctggagagtggagaagatgatggtgtgcagctgtcagatttttccctcattatcatt
gatgaatgtcatcacaccaataaggaggcagtctacaacaatatcatgaggcggtatttg
aagcagaaattgaagaacaataagctcaagaaacaaaacaaaccagtagttcacctgcca
cagattctaggactgacagcttcacctggtgttggaggagccaaaaagcaagctgaggct
gaaaaacatattttaaatatatgtgccaatcttgatgcatttaccattaaaacagtgaaa
gagaatctcggtcaacttaaacaccaaataaaggaaccatgcaagaagtttgtgattgca
gatgacaccagagaaaatccatttaaagagaaacttctggaaattatgacaagcatccaa
acttactgtcaaatgagtccaatgtcagattttggaacccaaccttacgagcaatgggcc
attctaatggaaaaaaaagccgctaaatctggaaatcgcaaaaaccgtgtctgtgcagaa
catttgaggaagtacaatgaagccctccaaatcaacgacacgatccgaatgattgatgca
tacagccacctggaaactttctatagtgacgagaaagaaaagaagttggcagtcttagag
gacagtgatgagagtgaagatgacgctagcggtcacgctgaggaacttaaggacaatgta
aagaaatctttgaaactggatgaaacagatgaatttctcatgaatttattctttgataac
aagaaaatgttgaaaaaactagctgaaaatccaaaatatgaaaatgaaaaactcattaaa
ttaagaaaaactatactggaacaattcacaaagactgaggaatcatctcgaggaattatt
ttcacaaaaactcggcagagcacctatgcactttcccagtggattacggaaaatgaaaag
tttgcagaagttggagtcaaagcacatcatctgattggagcaggacacagcagtgaagtc
aaacccatgacacagaatgaacaaaaagaagtcattagtaaatttcgcactggaaaaata
aatctgctgatcgctactacagtggcagaggaaggcctggatatcaaagaatgcaatatt
gttatccgttatggcctcgtcactaatgaaatagccatggtccaggcccgtggtcgagcc
agagctgatgaaagcacctatgtcctggttaccagcagtggttcgggagttactgaacgg
gagatcgttaatgatttccgagagaagatgatgtataaagctataaaccgtgttcaaaat
atgaagccagacgagtatgcacgtgagattttggcattacaggtacaaagtatcttggaa
aagaaaatgaaagtcaaaagaagtattgcaaaacattacattaacaatccatcattaata
acactactctgcaaaaattgtagtatgctagtctgctcaggggaaaacatccacgtaatt
gagaagatgcaccatgtcaacatgacacaggaattcaagagactctacattgtaagagaa
aacaaagcactgcaaaagaaatttgctgattatcaagcaaatggagagattatctgcaaa
tgtggccaggcttggggaacaatgatggtgcacaaaggtttagatttgccttgtctcaaa
ataaggaattttgtagtggagttcaaaaataactcatcaaagaaacaatataagaagtgg
gtggaattgcctgtcagatttcctgatcttgattgctcagaatattgcttgtgtagtgat
gaagactag
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integrated database retrieval system
