Cricetulus griseus (Chinese hamster): 100768127
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Entry
100768127 CDS
T02813
Symbol
Msh2
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X2
KO
K08735
DNA mismatch repair protein MSH2
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge01524
Platinum drug resistance
cge03430
Mismatch repair
cge05200
Pathways in cancer
cge05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
100768127 (Msh2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100768127 (Msh2)
09162 Cancer: specific types
05210 Colorectal cancer
100768127 (Msh2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
100768127 (Msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cge03400
]
100768127 (Msh2)
DNA repair and recombination proteins [BR:
cge03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
100768127 (Msh2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_27
DUF1967
Motif
Other DBs
NCBI-GeneID:
100768127
NCBI-ProteinID:
XP_027273794
UniProt:
A0A8C2QPM9
LinkDB
All DBs
Position
5:89297592..89350153
Genome browser
AA seq
934 aa
AA seq
DB search
MAVQPKETLQLESAAEAAFVRFFEGMPEKPSTTVRLFDRGDFYTAHGEDALLAAREVFKT
QGVIKYLRPAGAKTLQSVVLSKMNFESFVKDLLLVRQYRVEVYKNKAGNKASKENDWYLA
YKASPGNLSQFEDILFGSNDMSASIGTVGVKMSTVDGQRHVGVGYVDSIQRKLGLCEFPD
NDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQVIQRGGILITERKRADFSTKDICQD
LNRLLKGKKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFRQYM
RLDMAAVRALNLFQGSVEDTTGSQSLAALLNKCKTAQGQRLVNQWIKQPLMDKNRIEERL
NLVETFVEDSELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGVNQLPSVIQA
LKKYQGRHQALLMAVFVTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
LREVMDGLEKKMQSTLISAARGLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFS
TVDIQKNGVKFTNSELSSLNEEYTKNKGEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA
QLDAVVSFAHVSNAAPVPYVRPVILEKGKGRIVLKASRHACVEIQDEVAFIPNDVCFEKD
KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSILDCILARVGAGDSQLK
GVSTFMAEMLETAAILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF
ATHFHELTALASQIPTVNNLHVTALTSEETLTMLYQVKKGVCDQSFGIHVAELANFPRHV
VECARQKALELEEFQSIGTSQGRDGEMEPPAKKCYLEREQGEKIIMEFLSKVKQVPFTDM
SEENITRKLKQLKAEVVAKNNSFVNEIISRIKVK
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagcctaaggagacgctgcagttggagagcgcggccgaggcggctttcgtg
cgcttctttgagggcatgccggagaagccgagcaccacggtgcgcctcttcgaccgcggc
gacttctacacggcgcacggcgaggacgcgctgctggcggcccgcgaggtgttcaagacc
cagggcgtgatcaagtacctgcggccggcaggggcaaagacactgcagagtgttgtgctt
agtaaaatgaattttgagtcttttgtaaaagatcttcttctggttcgtcagtatagagtt
gaagtttataagaataaagctggaaataaggcgtccaaggagaacgactggtatttggca
tacaaggcttctcccggcaatctttctcagtttgaagacattctgtttggtagcaatgac
atgtcggcttccattggcactgtgggtgttaaaatgtccacagttgatggtcagagacac
gttggagttgggtatgttgattccatccagagaaagctgggcttgtgtgagttcccagat
aatgaccagttctccaacctcgaggcccttctgattcagattggaccaaaggaatgtgtt
ttaccaggaggagagactgccggcgacatggggaaactgaggcaggttattcagagagga
gggattctgatcacagaaagaaagagagctgacttttccactaaagacatttgtcaggat
ctcaaccggctattaaaaggcaaaaaaggagaacagatgaatagtgctgtcttaccagag
atggagaatcaggttgcagtttcatcattatctgcagtaatcaagtttttagaactcttg
tcagatgattcaaatttcggacagtttgaactgactacttttgacttccgccagtacatg
agattggacatggcagcagttagagccctcaaccttttccagggttctgttgaagatacc
actggctctcagtctctggctgcgttattgaataaatgcaaaactgctcaaggacaaaga
ttggttaaccagtggattaaacagcctctcatggataagaacagaatagaagaaagatta
aatttagtagagacttttgttgaggattcagaactgaggcagactttacaggaggactta
cttcgtcgatttccagatcttaaccgacttgccaagaagtttcagagacaagcagcgaac
ttacaagactgctaccgactatatcagggtgtgaaccagctccccagcgtcatacaggct
ctgaagaaataccaaggaaggcaccaggcattgttgatggcagttttcgtgactcctctt
attgatcttcgttctgatttttcgaaatttcaagaaatgatagaaacaactttggatatg
gatcaggtggaaaaccatgagttccttgtaaaaccttcatttgatcctaacctgagtgaa
ctaagagaagtaatggatggcctggaaaagaagatgcagtctacattaataagtgcagcc
cggggtcttggattggaccctggcaaacagattaaattggattccagtgcacagtttgga
tattattttcgtgtaacctgcaaggaagagaaagtccttcgcaacaataagaatttcagc
acagtggatattcagaagaacggggttaagtttaccaacagtgaactgtcttctttaaat
gaagaatatactaaaaataaaggcgagtatgaggaggcccaggatgccattgttaaagaa
attgtcaatatttcttcaggctatgtagaaccaatgcagacactcaatgatgtgttagct
cagttagatgctgttgtcagctttgctcacgtctcaaatgcagcacctgttccttacgta
cggccagtcatcttggagaaaggaaaaggaagaattgtattgaaagcctccaggcatgct
tgtgttgaaattcaagatgaggttgcatttattccgaatgatgtgtgctttgaaaaggat
aaacagatgttccacatcattactggtcccaatatgggaggtaaatcaacatacatccgt
cagactggagtgattgtactcatggcccaaattgggtgttttgtgccctgtgagtcagca
gaggtgtccattttagattgcatcctggctcgagttggggctggtgacagtcagctgaaa
ggtgtttccacgttcatggctgagatgctggagaccgcagctatcctcaggtcagcaacc
aaagattccttaataatcattgatgaactgggaagaggaacctctacgtatgatggattt
gggttagcatgggctatatcggagtatattgcaacgaagattggtgccttttgcatgttt
gcaacccattttcatgaacttactgctttggctagccagataccaactgtcaataatctg
cacgtcacagcactaactagtgaagaaaccttaactatgctttaccaagtgaaaaaaggt
gtctgtgatcagagttttgggattcatgtggctgagcttgctaatttccctcggcatgtg
gtagagtgcgccagacaaaaggctctggaacttgaagaatttcagagcattggaacctca
cagggacgtgatggagaaatggaaccacccgcaaagaagtgctacctggagagagagcaa
ggtgagaaaattattatggagttcctgtccaaggtgaagcaagtgccctttactgacatg
tcggaggagaatatcacaaggaagctaaaacaactaaaagccgaggtggtcgcaaagaat
aatagttttgtaaatgaaatcatttcacgaataaaggtcaaatga
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