Cricetulus griseus (Chinese hamster): 100773741
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Entry
100773741 CDS
T02813
Symbol
Casc3
Name
(RefSeq) LOW QUALITY PROTEIN: protein CASC3 isoform X2
KO
K14323
protein CASC3
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge03013
Nucleocytoplasmic transport
cge03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100773741 (Casc3)
03015 mRNA surveillance pathway
100773741 (Casc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cge03019
]
100773741 (Casc3)
Messenger RNA biogenesis [BR:
cge03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100773741 (Casc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
100773741
NCBI-ProteinID:
XP_027279916
UniProt:
A0A9J7G8M6
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All DBs
Position
7:111895785..111919167
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AA seq
701 aa
AA seq
DB search
MADRRRQRASQDTEDEESGASGSDSGSPARGGGSCSGSAGGGGSGSLPSQRGGRGGGLHL
RRXESGGAKSAEESECESEDGMEGDAVLSDYESAEDSEGEEGEYSEEENSKVELKSEGND
AADSSAKEKGEEKPDTKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPAYI
PRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALYGY
DIRSAHNPDDIKPRRIRKPRFGSPPQRDPNWIGDRSNKSHRHQGPGGTLPPRTFINRNAS
GTGRMSASRNYSRSGGFKEGRTSFRPVEAGGQHGGRSGETHKHEANYRSRRLEQTPMRDP
SPEPDAPLLGSPEKEEAASETPAAAPDTVPPAPDRPIEKKSYSRARRTRTKVGDAMKAAE
EAPPPAEGLTSAATIPETAPPPAAKTGNWEAPVDSTTGGLEQDVAQLNIAEQNWSPGQPS
FLQPRELRGMPNHIHMGAGPPPQFNRMEEMGVQGSRAKRYSSQRQRPVPEPPAPPVHISI
MEGHYYDPLQFQGPIYTHGDSPAPLPPQGMIVQPEMHLPHPGLHPHQSPAPLPNPGLYPP
PVSMSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQAPSQVYG
GVTYYNPAQQQVQPKPSPPRRTPQPVSIKPPPPEVVSRGSS
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcgtcggcagcgcgcttcccaggacactgaggacgaagaatctggtgct
tcgggttctgacagcggctctccggcgcggggcggcggcagctgcagcgggagcgccgga
ggcggcggcagtggctcgctgccgtctcagcgcggcggccgcggcgggggccttcatctg
cggcggnnggagagcgggggcgccaagagcgccgaggagtcggagtgtgagagtgaagat
ggcatggaaggcgatgctgttctttccgattatgaaagtgcagaagattcagaaggtgaa
gaaggagaatacagtgaggaggaaaactccaaggtggagctgaaatcagaaggtaatgat
gctgctgattcctcagcaaaagagaagggagaagaaaagcctgatactaaaggcactgtg
actggagagaggcaaagtggggatggacaggagagcacagagcctgtagagaataaagtg
ggtaaaaaaggccctaagcatttggatgatgatgaagatcggaaaaatccagcgtatata
ccaaggaaagggctcttctttgagcatgatcttcgagggcaaactcaggaagaggaagtc
cgacccaagggacgtcagcgaaagctatggaaggatgagggtcgctgggagcatgataag
ttccgtgaagatgaacaggctccaaagtcccgacaggaactcattgccctttatggctat
gatattcgatctgctcacaatcctgatgacatcaaaccccggagaatccggaagcctcga
tttggaagtcccccacaaagagatccaaattggattggtgatagatcaaacaagtcccat
cgccaccagggtcctgggggtaccctaccaccaaggacatttattaataggaatgcatca
ggtactggccgcatgtctgcatccaggaattattcacgatctgggggcttcaaggaaggt
cgtactagtttcaggcctgtggaggctggtgggcagcatggtggccggtctggtgagact
cataaacatgaagctaattaccggtcacgacgtctggagcaaacccctatgagggatcca
tctccagaaccagatgctccgttgcttggcagtcctgagaaagaagaggcggcctcggag
acaccagctgccgctcctgacactgtaccaccagctcctgacaggcccattgagaagaaa
tcctattcccgggcaagaaggacccggaccaaagtgggggatgcaatgaaagctgctgag
gaggctcctcctccagctgaagggctcacttcagcagccacaatcccagaaacagctcct
cctccagctgctaagactgggaactgggaggctccagtagattctaccacaggtggactg
gagcaagatgtggcacagctaaatatagcagaacaaaactggagtccaggacagccttcg
ttcctgcaaccacgggagcttcgaggtatgcccaaccacatacatatgggagcaggacct
ccacctcagtttaaccggatggaagaaatgggtgtccagggtagtcgagctaaacgttat
tcatcccagcggcagagacctgtgccagagccccctgctcctcctgtccatatcagtatc
atggagggacattactatgatccattgcagttccagggaccaatctatacccatggcgac
agccctgccccactgcctccacagggcatgattgtacagccagaaatgcaccttcctcat
ccaggtttacatccccatcagtcaccagcacctctgcccaatccgggtctctacccacca
ccagtgtccatgtctccaggacaaccaccaccccagcagttgctcgctcctacttacttt
tctgctccaggtgtcatgaattttggtaaccccagttacccttatgctccaggagcatta
cctcctcctccacctcctcatctgtatcctaacacacaggctccatcacaggtgtatggg
ggagtgacctactataaccctgcccagcagcaggtgcagccaaaaccctccccaccccgg
aggactccccagccagtgtccatcaagccccctccacctgaggttgtaagcaggggttcc
agttaa
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