Capnocytophaga gingivalis: CGC50_13530
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Entry
CGC50_13530 CDS
T05260
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cgh
Capnocytophaga gingivalis
Pathway
cgh03030
DNA replication
cgh03430
Mismatch repair
cgh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cgh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CGC50_13530
03430 Mismatch repair
CGC50_13530
03440 Homologous recombination
CGC50_13530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgh03032
]
CGC50_13530
03400 DNA repair and recombination proteins [BR:
cgh03400
]
CGC50_13530
Enzymes [BR:
cgh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CGC50_13530
DNA replication proteins [BR:
cgh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CGC50_13530
DNA repair and recombination proteins [BR:
cgh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CGC50_13530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
GLUCM-like_C
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
ATA88069
UniProt:
A0A250FSD3
LinkDB
All DBs
Position
complement(2817841..2822295)
Genome browser
AA seq
1484 aa
AA seq
DB search
MYLIFDTETTGLPRNYNAPISDSENWPRAVQIAWQLHDEKGALLEHKDFLIIPDGYTIPY
DAERIHGISTELATEQGVSIHKVFEEFEKALSKTQYIVGQNIGFDIHIMGAEFYRYGVST
VLDKLPILDTCSELTAELCKIPGGRAGKFKYPNLTELHEFLFGTPFAEAHNATADVEATA
RCFFELLRRNEGFSSSAISPEAILLIQENHPSPISLWGLKHINLKSASEKLKSKEQRGLS
DSEISENLALLQSAPFAHLHNHSQHSVLQSTASIADLVNAAAKEQMPAVALTDHGNMMGA
FHFTKEVAKYNKEAKAKNARAQEEGNAPTHTLLKPIIGCEFYVCENHLDKTKKDNGYQIV
LLAKNKEGYQNLIKMASIAYTEGFYYVPRIDKEIVQRYKDQVIALSGNLQGEIPSKILNQ
GNRQAEEALLWWKELFQDDFYIELMRHGQEDENRANTVLIELAKKHAIKLVATNNTYYIN
PKDANAHDILLCVKDGEKQATSIGQGRGFRNGLPNEEYYFKSSEQMKELFKDIPEAILSI
QEIIDKITPYELARDILLPKFSIPKEFQVEDDPTGKKGENKYLRHLTYIGAEKRYKELTD
EIRERIDFELSIIEKTGYPGYFLIVEDFITAARNMGVSVGPGRGSAAGSAVAYCLGITNI
DPIAYDLLFERFLNPDRVSMPDIDIDFEDDGRGRVLDYVIGKYGANQVAQISTYGTMAAK
SSIRDTARVLDLPLKDADQIAKLVPNISLKKIFSLPDEELKEKVGSDFPKVTELKKIAQG
HDLAAKTVQQACILEGSVRNTGIHACGVIITPDDITNFVPVMLAKDSDLFVTQFDNSVVE
SAGLLKMDFLGLKTLTILKDAVSLIQKRHNITLDIEEIPLDDVPTYELFQRGETIGIFQY
ESPGMQKHMRELKPTVFGDLIAMNALYRPGPMDYIPSFIHRKHGKEPITYDLADMEEYLK
DTYGITVYQEQVMLLSQKLAGFTKGEADKLRKAMGKKLKDVLAEMKPKFIEGGGKKGHPA
ETLEKIWKDWEAFASYAFNKSHSTCYAWIAYQTAYLKANYPAEFMAAVLSNNMNDIKSIS
FFLSECHRMGIKVLSPDVNESEYKFTVNKEGAIRFGMGAVKGLGKAAVDTIVETRKSGPY
KSVFDMVKRIDLKSANKKAFESLVLAGGFDSFPEVHRAQFFHQEPSENMVFLEKILRYGA
KAQESAKSIQLSLFGDSPETQFPEPKMPKTEEWSPMEKLHREKEVVGIYISGHPLDIFHY
QLKYLCNKEVIELAEGIERFENQEVRFGGIITKIEHKTSKTGKGWGLFTIEDYSGGAEFR
IFGEEYLKFRHFLCENQFVFIKAHISPGYVNKEGVRSAPKMNFTFVDFLENTLSLVRKLQ
IATELKEINKVNIDAFKEFLQEFQGNTPISFLIIGENEKKKIELTLNCPHSKIAISKELF
DWLSASHMPYRINDEDRWLNTLQEEKPTLALDTEIIIEEFSEIE
NT seq
4455 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaatctttgatacagagaccacagggctgccccgcaactacaatgcacctatc
agtgatagtgaaaactggcctcgtgccgtacagattgcttggcaattgcacgatgaaaag
ggagctcttttagaacataaagacttcctaataatccctgatggctatactattccctac
gatgcagagcgtatccatggaatttctaccgaattggccactgagcagggagtaagcatt
cacaaggtattcgaagaattcgaaaaagcactttccaaaacacaatacatagtagggcag
aatataggcttcgatatccatatcatgggtgccgaattctatcggtatggggtaagtacc
gttttggacaaactgcctatattagatacatgtagcgagcttacggctgaattatgcaaa
attcctggtggacgtgcaggaaagtttaagtaccccaacctcaccgagctacatgagttt
ctctttggaactccttttgctgaagcacataatgctactgccgatgtggaagctactgct
cgttgtttctttgaactcttacgcagaaatgaaggtttttcctcctcggcaatctcccca
gaggctatactacttatccaagaaaaccacccctcccctatttctctttgggggttgaaa
catatcaacttaaaatcggcctctgaaaaactaaaaagtaaggaacagagagggctttct
gactctgagattagcgaaaatctcgcccttttacaatcggctccctttgctcatctgcac
aaccattctcaacattccgtattgcagtctactgcatctatagccgacttagtaaatgct
gccgccaaagagcagatgccagcggtagcgctgactgaccatggcaatatgatgggagct
ttccacttcaccaaggaggttgccaagtataacaaagaagctaaagccaagaatgcccga
gcccaggaagaggggaatgcacctacccataccctactcaaacctatcattggttgtgag
ttctatgtctgtgaaaaccatttagataaaacaaagaaagacaatggctatcagatagtt
ctcttagcgaaaaacaaagaagggtaccaaaatctgattaaaatggcatctatcgcctat
acagaaggattttattatgtgcctcgtatagataaagaaatcgtacagcgctataaagat
caggtcattgcactctctggaaatctccaaggtgaaataccctctaagattctcaaccaa
ggaaaccgacaagcagaagaggccttgttgtggtggaaggaactcttccaagatgatttc
tatatagaactaatgcgacatggacaagaggacgaaaatcgtgcgaatactgtccttata
gaattagctaaaaaacatgccatcaagcttgtagctaccaataacacttattatatcaat
cctaaagatgccaatgcccatgatattttgctttgcgtaaaggatggagaaaaacaagct
acctccatagggcaagggcgaggttttcgcaatggactgcccaatgaggaatattatttt
aaatcctccgaacagatgaaagaactcttcaaggatatccctgaggcaattctttccata
caagagattattgacaaaattactccttacgaactggcacgagatattcttttgcctaaa
ttttccattcccaaggaattccaagtagaggatgacccgacaggcaaaaagggagaaaat
aaatatctaagacacctcacttatataggtgccgaaaagcgctataaagagcttactgac
gaaattcgagaacgtattgattttgagctttctattatagaaaaaacaggatatcctgga
tacttccttattgtggaagacttcatcactgccgcgcgcaatatgggagtctctgtaggt
cctgggcgtggatctgctgcgggttcagcagtggcttactgtttgggaatcaccaatata
gaccctatcgcttacgacctactttttgagcgttttctcaaccctgatcgtgtgagcatg
cccgatattgatattgacttcgaggatgacggacgtggtcgagtattggactatgtaata
ggtaaatatggagccaaccaagtagctcaaatatctacctatggcactatggctgctaaa
tcatctataagagatactgcacgtgttttagacctgccgctgaaggatgccgaccagatt
gccaaactcgttcctaatatttctctcaaaaaaatcttttctctccctgatgaagagctt
aaggaaaaggtagggagtgatttcccaaaagtcactgaacttaagaaaattgcacagggg
catgatctggctgccaagacagtacaacaagcttgtatcttggaaggatcagtgcgtaat
acaggaattcatgcctgtggagttatcatcactcccgatgatatcaccaacttcgttcct
gtgatgcttgccaaggactcagacctattcgttacccagttcgacaactctgttgtggag
agtgcaggactactgaagatggacttcttgggactgaagaccctaactatccttaaggat
gcggtatctttgatccaaaaacgacataacatcactctggatatagaagaaattccctta
gatgatgtccctacctatgagctcttccagcgtggtgagaccattggcattttccaatac
gaatcccctggtatgcaaaaacacatgcgagagctcaagcctactgttttcggggatctt
atcgctatgaatgccctctaccgaccaggacctatggattatattccaagttttatccat
cgtaagcacgggaaggaacctatcacttacgacttggctgatatggaagaatacctcaag
gatacctatgggatcactgtataccaagaacaggtaatgcttctttctcaaaagttggct
ggtttcactaagggggaagccgataaactcagaaaggcaatgggaaaaaaactcaaggat
gtcttggccgagatgaagcctaagtttatcgaaggaggaggtaaaaaagggcaccctgcc
gagactctggaaaagatatggaaagactgggaagcctttgccagctatgccttcaacaag
tcgcactccacttgttatgcatggattgcctaccagacagcctacctgaaggcaaactat
ccagctgaattcatggcggcagtgctctcgaacaacatgaacgatatcaagtccatcagt
tttttcctttccgaatgtcaccgtatgggaatcaaggtactcagccccgatgtgaacgaa
tctgaatataaattcactgtaaacaaagagggagctatacgttttggaatgggagctgtc
aagggattaggcaaggctgcggtagatacaattgtagaaaccagaaagtctggcccgtac
aagtctgtttttgatatggtaaaacgtatagacctcaagtcagccaacaagaaggctttc
gaaagccttgttttagctggaggatttgactctttcccagaggtacatcgggcacagttt
ttccaccaagaaccctcagagaatatggttttcttagagaaaatactccgctatggtgcc
aaggcacaagaaagtgctaagtccatacaactgagcctctttggagacagtcctgaaacc
caattcccagaacccaaaatgcccaaaacagaggaatggagtcctatggaaaaacttcat
cgtgaaaaagaagttgtcggaatctatatctctggacaccctttggatatcttccattac
caattaaagtacctctgcaacaaagaagttatagagctcgctgaaggaattgaaagattt
gaaaatcaagaagttagatttggaggaattattactaaaatagaacataaaaccagtaag
accggtaagggctgggggctcttcactatagaagactatagtggaggggctgagttccgt
atctttggagaggaatacctcaagtttcgtcatttcctatgtgaaaaccaattcgttttt
atcaaagcacatatcagcccgggctatgtcaataaagagggagtccgaagtgcccctaag
atgaactttacttttgttgatttcttagaaaacacccttagtctcgtacgtaagttgcag
atagccaccgaactaaaagaaatcaataaagtaaatattgatgctttcaaggagtttctt
caagaatttcagggaaacactcctataagtttccttatcattggagaaaatgagaaaaaa
aaaatcgaattgacgctgaactgcccccattctaaaatagctatcagcaaggaactcttc
gattggctttctgcctctcatatgccttatcgtattaatgacgaagatcgttggctcaat
accttacaagaagaaaagcctacccttgctttagatacagaaatcataatagaggaattt
tctgagattgaatag
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