Cottoperca gobio: 115005754
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Entry
115005754 CDS
T07513
Name
(RefSeq) ATP-dependent RNA helicase DDX3X-like isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
cgob
Cottoperca gobio
Pathway
cgob04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
115005754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgob03019
]
115005754
03041 Spliceosome [BR:
cgob03041
]
115005754
03036 Chromosome and associated proteins [BR:
cgob03036
]
115005754
Enzymes [BR:
cgob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115005754
Messenger RNA biogenesis [BR:
cgob03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
115005754
mRNA cycle factors
Common to processing body (P body) and stress granule
115005754
Spliceosome [BR:
cgob03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
115005754
Chromosome and associated proteins [BR:
cgob03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
115005754
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
Motif
Other DBs
NCBI-GeneID:
115005754
NCBI-ProteinID:
XP_029283569
Ensembl:
ENSCGOG00000009527
UniProt:
A0A6J2PD72
LinkDB
All DBs
Position
Unknown
AA seq
719 aa
AA seq
DB search
MSHVVVDNPHGLDQQLAALDLNNADGQGGGTGRRYIPPHLRNKESSKNDSPGWDGGRGNG
FVNGYNDNCTNGGFGGRGPPRNDRGGRGAYRGNGGGGSFDQQLQNAGVGGDGNWAGAPRD
AAYNSFGGRTDRSKSTFFNDRGTGGSRGGRFERGGFSGGGGGGSRWTDETRDDDWSKPTP
ANERLEHELFSASNTGINFEKYDDIPVEATGSNCPPHIDVFHDVDMGEIIMANIALSRYD
SPTPVQKHAIPIIKTKRDLMACAQTGSGKTAAFLLPVLSQMYCEGPGEALSAAKNSGQDN
GRYGRRKQYPIGLILAPTRELALQIYDEARKFAYRSRVRPCVVYGGADIGQQIRELERGC
HLLVATPGRLVDMMERGKIALDYCNFLVLDEADRMLDMGFEPQIRRIVEQDTMPAKGSRQ
TMMFSATFPKEIQILARDFLEDYIFLAVGRVGSTSENITQKVVWVEDNDKRSFLLDLLNA
TVIPSDAPEGGPEVADKPVKESLTLVFVETKKGADALEDFLYHEGYSCTSIHGDRSQRDR
EEALHQFRSGRCPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGL
ATSFFNDKNSNITKDLLDILVEAKQEVPSWLESLAYEHQHKSTTRGRGKRFSGGFGARDY
RQTPGGGPGNFPGSRGGTRTPGGSRGFGGGGFGGGSNFYSNDGYGGSYSNSGSVDWWGN
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggtcgttgataatccacacggtctagatcagcagcttgctgccctagac
ttgaacaacgctgacggacaaggcggaggaactggcaggcgttacattccacctcacttg
agaaacaaagaatcatctaaaaatgattcacctggatgggacggtggacgcggcaatgga
tttgtgaatggttataacgacaactgcacaaatgggggctttggaggacgaggaccccct
cgcaatgatagaggtgggcgtggcgcctaccgtggtaacgggggtggaggctcgtttgat
caacaattacaaaatgcaggggtcggcggtgatggcaactgggccggagcccctagggat
gctgcctacaacagctttggcggacgcactgataggtcaaagtctaccttcttcaatgac
cgtgggaccggaggctcaagggggggaagatttgagcgtgggggcttttctggtggtgga
ggaggcggcagccgctggacggacgaaaccagagacgacgattggtccaagcctactcct
gccaacgagcgcctggaacatgagcttttctctgcaagcaacactgggataaactttgag
aaatacgatgatattcccgtggaggccactggaagcaattgcccgccccacattgacgtc
ttccacgatgtcgacatgggggagattattatggctaacatcgccttgagtcgctacgat
agtcccaccccggtgcagaagcatgctatccccatcatcaagaccaagagggacctgatg
gcttgcgcccagactggctccgggaagaccgctgcgttcttgctgccagtgctgagtcag
atgtactgcgagggtccaggagaggcgctgtccgccgccaagaacagtggacaggataac
ggcaggtatggccgccgtaagcagtacccgatcggcctcatcctggcccccaccagagag
ctggcgttgcagatctacgacgaggcgagaaagttcgcctaccgctctcgtgtgcgtccc
tgcgtggtgtatggcggtgctgacattggccagcagatcagggagttggagagaggctgt
cacctgctggtggccacacctggacgtctggttgacatgatggagaggggaaagatcgcc
ctggactattgcaacttcctggtcctggacgaggctgaccgcatgttggacatgggattt
gagccgcagatcagacgcattgtggagcaggacacgatgccggctaaaggcagccgccag
accatgatgttcagtgccaccttccccaaggagatccagatcctcgctcgtgacttcctg
gaggactacattttcctggcagtgggccgtgtgggttccacttcagaaaacatcacgcag
aaggtggtctgggtggaggataacgacaagaggtcgttcctcctcgacctgctcaatgcc
acagttattcccagtgatgcgccggaaggtgggccagaagttgcagataaaccggtcaaa
gagtcgttgactctggtgtttgtggaaaccaagaagggagccgatgctctggaagacttc
ctttaccacgagggttactcctgcaccagcatccacggagaccgatcccagagagaccgg
gaggaggctctgcatcagttccgctccgggcgctgccccatcttggtggccacagctgtg
gctgccagaggtctggacatcagcaatgtgaagcacgtcatcaactttgatttgcccagc
gacattgaggaatacgttcaccgtattggccgtacgggacgtgtgggcaaccttggtctg
gccacgtcgttctttaacgacaaaaacagcaacataaccaaagacttgctggacattttg
gtggaggccaagcaggaggttccctcctggcttgagagcctggcctacgagcaccagcac
aagagcaccacccgaggacgcggcaagaggttctctggtggtttcggcgctcgagattac
cgtcagacgcctggaggtggccctgggaacttcccaggcagccggggcggcacgcgaacc
cctggaggaagccgtggttttggtggaggtggatttggcggcggcagcaacttctacagc
aacgacggctacggaggaagttacagcaactctggtagtgtggattggtggggcaactag
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