Cottoperca gobio: 115007028
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Entry
115007028 CDS
T07513
Symbol
usp1
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 1 isoform X1
KO
K11832
ubiquitin carboxyl-terminal hydrolase 1 [EC:
3.4.19.12
]
Organism
cgob
Cottoperca gobio
Pathway
cgob03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
115007028 (usp1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgob01002
]
115007028 (usp1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgob04121
]
115007028 (usp1)
03400 DNA repair and recombination proteins [BR:
cgob03400
]
115007028 (usp1)
Enzymes [BR:
cgob01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115007028 (usp1)
Peptidases and inhibitors [BR:
cgob01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
115007028 (usp1)
Ubiquitin system [BR:
cgob04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
115007028 (usp1)
DNA repair and recombination proteins [BR:
cgob03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
115007028 (usp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF6827
Motif
Other DBs
NCBI-GeneID:
115007028
NCBI-ProteinID:
XP_029285548
Ensembl:
ENSCGOG00000019734
UniProt:
A0A6J2PHJ0
LinkDB
All DBs
Position
4:12935753..12944194
Genome browser
AA seq
807 aa
AA seq
DB search
MPGLQGENVVAALGSPIKKSKLSLKFLQKKEAKRALDFSEPQADEPKTVEQVEPEASSCD
QVVPGPSPRPASAGLLLPFDKRETVVPFVGLNNLGNTCYLNSILQVLYYCPGLRDGIKKL
YSLSKRKDKPKEESDKSEEQSEDVTETLPAQMELLSSFNSLITSVEQLQCSFLLNPDGFS
EGELSTPPRKILHTLRQLNPMYEGYLQHDAQEVLQCILGYIQEACDTIRKELETEDADVS
EVKLENGGHLDSSCSATESKTPTEEDGQVSGKRKSDTEVGNAKKKPKSVKSKKSDAEDNK
PLTRSKRKSTSDITVGNTRDKVEEEAEDEGTKKVNKEEEKGSDAEGKGEKASKEADGKIQ
KRSKLSWLRPSGKQPSIFSKFLSVGKISSVKTQNKPEEESALTDQQSPNHKTSEESSAQN
MAEDKKPVKLQEGLDMMEHLFQGRLVLRTRCLECESFTERREDFQDISVPVLDDEPSSPD
DLSEVSPDPKPELKTLKWAISQFASVERIVGEDKYFCETCHHYTEAERSLLFDKTPEVIT
IHLKRFSANSSDLDPYAGLSKVNTPLQTPLTLSLEEWCTRPSSTMGQRYQLFAVVMHSGI
TISSGHYTAYCRMSDLKDVKLWLRDTKETKEEESKEATRVKDEVLDYDDGEVSFSLNARG
KRGASLAGSKTAGKKLLEGAVGLLGGQRSLASCDIGSSSKHTEKASSSGSTEGSKRRKPV
NSLSQNTEAGLNKEARGGEKTSCGGVEATEQQALNNLLEYEGKWLLFDDSEVRLFEEEDF
LQACSPETSSSSTPYLLFYRRMPEPGH
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgccaggtctgcagggtgaaaatgttgtggcggcgctggggagccccatcaagaagagt
aagctttctctgaagttccttcagaagaaagaagctaagcgggctctggatttctctgaa
cctcaagcagatgagcccaaaacagttgaacaagtggagcctgaagcaagcagctgtgat
caggtggtccccggtccttctcctcgtccagcctcagccggccttctcctgccgtttgac
aagagagagaccgtggtgccatttgtggggctcaacaacttgggcaacacctgctatttg
aacagcatcttacaggtgctgtactactgccccgggctcagagacggcataaagaaactg
tacagcctgtctaaaagaaaggacaaaccaaaggaagaaagtgataaaagtgaagagcag
tcagaagatgtcactgagactttgccggctcaaatggaactcctctcgagcttcaacagt
ctgataacatcagtggagcagctgcagtgcagcttcctgttaaaccccgacggcttcagt
gaaggagaactctctacaccgcctcgtaaaatactccacacactcaggcagctgaacccc
atgtatgaaggctatcttcagcatgacgctcaggaggtgctgcagtgcatcctgggatat
atccaagaggcttgtgacaccatcaggaaggagttggagacagaggatgccgatgtatct
gaggttaaacttgagaacggcggccatttggattccagctgctctgcgacagaatccaag
actcccacagaagaagacggccaagtcagcggcaagaggaaaagtgacaccgaagtggga
aatgccaaaaagaagccaaaatccgtcaagtccaagaaatctgatgcggaggataataaa
cccctgactcgatcgaagaggaagtccaccagtgacatcacggtgggcaacacccgagac
aaagttgaagaggaggccgaggatgaggggacgaagaaagtgaataaggaggaggaaaaa
gggagtgacgctgaggggaaaggtgaaaaggcatctaaagaggcagatgggaaaatacag
aaaaggtctaagctgagctggttgaggccttctgggaaacaaccaagtattttctccaag
tttctcagcgtggggaagatcagctccgtgaagacccaaaacaaaccagaggaggagagc
gcactcactgaccagcagagtccgaaccacaagaccagcgaggagagttcagcacagaac
atggctgaagacaagaagccagtaaaacttcaagagggtctggacatgatggagcacttg
ttccagggccgactggttctgcggactcgctgtctggagtgtgagagcttcactgagagg
agagaagacttccaggacatcagtgtcccggtgctcgatgacgaacccagcagcccagac
gacctctccgaggtctctcctgatcccaaaccagagctgaagactctgaaatgggccatc
tcccagtttgcatcagtggagcgcatcgttggggaggacaaatacttctgtgagacgtgt
catcattacacagaagctgagagaagtctgctgtttgacaaaactcctgaagtgatcacc
attcacctgaagcgcttctctgccaacagctctgacttggacccatatgcaggactgtct
aaagtcaacactcccttgcagacccctttgaccttgtctctggaagagtggtgcacccgg
ccctcgtccacaatgggtcaacgctatcagctgtttgctgtggtcatgcacagtggcatc
accatcagcagcggccactacaccgcctactgccgtatgtccgatctgaaagatgtgaag
ctctggctgcgggacacaaaagaaacgaaggaggaggaaagtaaagaggcaacgagggtg
aaagacgaagtgctggactatgatgacggagaggtgtctttcagtctgaatgcaaggggg
aagagaggtgcgagtttggctggcagcaaaacggcaggaaagaagctgttagagggggcc
gttggactcttagggggccagaggagtctggctagttgtgacattgggagcagcagcaaa
cacacggaaaaagcttccagcagtggatcaacagagggatccaaacggaggaaaccagtt
aatagcctgagccaaaatacagaagcaggactaaacaaggaggctagaggaggagagaag
acttcctgtggcggggtggaggccacagagcagcaggctttgaacaacctccttgaatat
gagggcaaatggctgctgtttgatgactctgaggtgcgtttgtttgaggaggaggatttc
ctgcaagcctgctcccctgagacatcatcctcatcgacaccgtacctgcttttctacaga
aggatgcctgaacccggacactaa
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