Cottoperca gobio: 115015058
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Entry
115015058 CDS
T07513
Name
(RefSeq) protocadherin Fat 4-like
Organism
cgob
Cottoperca gobio
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
MIG-14_Wnt-bd
YmzC
Motif
Other DBs
NCBI-GeneID:
115015058
NCBI-ProteinID:
XP_029298082
UniProt:
A0A6J2QL86
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All DBs
Position
10:complement(12903664..12911971)
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AA seq
1615 aa
AA seq
DB search
MMAIMRLTLQSCAVALLLFSLPLVNGDVSFSFPEEMKRGSVIGNIAKDLGLETSRLTARK
ARIDTDGSDKRYCDLNLRNGDLTVAERIDREGLCGDKASCVLKQELMLENPLELHRISLH
VKDINDNSPQFNKDLIDIDISESAVKGARFPIEEAHDADIGTYSVQTYNLQSNEHFILGV
GTNSVQLVLNKELDRENLKEMNLLLTALDGGSPQRSGTVVIHITVLDANDNVPVFSQAVY
KASLPENSPRSTVVLTVSATDADEGLNGDVTYDFGHISEDIKSMFTIDHKTGEIKLTTTV
DFEMSSSFELRVTAKDGLGLTSYAKVIIDVTDVNDNAPIINLKSLTNPIPENVSPGTEVG
IINVQDRDSENNRQVRCSIQQNVPFKLVPSIKNYYSLVTTGQLDRELVSDYNITISATDE
GSPPLSSSKTVQLSVADINDNPPVFEEQSYSAYVSENNKPGSTLCSVTARDPDWRQNGTV
IYSLLPGEVNGAPVSSYLSVNGDTGVIHAVRSFDYEQFRSFKVHVTARDNGSPPLSSNVT
VSVFVSDVNDNSPQILYPAPEGNSFMTELVPKAAHGGSLVSKVIAVDADSGQNAWLSYHI
VKSTDPGLFTIGLHSGEIRTQRDISESDSMKQNLIVSVKDNGQPSLSATCSMYLLISDNL
AEVPELKDISYDEKNSKLTSYLIIALVSVSTFFLTFIIIILGVRFCRSRKPRLLFDGAVA
IPSAYLPPTYADVDGTGTLRSAYNYDAYLTTGSRTSDFKFVSSYNDNTLPADQTLRKSPS
DFVDPFEDLEAAVEVGTVKNILMGDKGFSALRPILCFASFIVTLQLVNGDLSYSVPEEMK
RESVIGNIAKDLGLDLRTLSSRKARVDFEGTRKRYCDINLSTGYLVTSERMDRESLCGKK
PSCVVKVDLVLENPLELHRVSLHIQDVNDNSPQFNEDLIEMEMSELAEKGNRFSIDEAHD
ADIGQNAVQRYSLQKNDNFILSVDSNKVELVLENKLDRERQQDINLLLTALDGGSPQRSG
TVVIHVTVLDANDNAPVFSQAVYKASLPENSPPDTLVINVSATDADEGVNGDVTYHFGHV
SDDNINIFSIDPKTGEIKVTGVIDFEEINYFEMRIKAKDGLGLTSYAKVIIDVTDVNDNA
PVIYLKSLTNPIPENVSPGTEVGIINVQDRDSENNRQVRCSIQQNVPLKLVPSIKNYYSL
VTTGQLDRELVSDYNITISATDEGSPPLSSSKTVQLSVADINDNPPVFEEQSYSAYVSEN
NKPGFTLCSVTARDPDWRQNGTVIYSMLPGEVNGAPVSSYLSVNGDTGVIHAVRSFDYEQ
FRSFKVHVTARDNGSPPLSSNVTVSVFVSDVNDNSPQILYPAPEGNSFMTELVPKAAHGG
SLVSKVIAVDADSGQNAWLSYHIVKSTDPGLFTIGLHSGEIRTQRDISESDSMKQNLIVS
VKDNGQPSLSATCSMYLLISDNLAEVPELKDISYDEKNSKLTSYLIIALVSVSTFFLTFI
IIILGVRFCRSRKPRLLFDGAVAIPSAYLPPTYADVDGTGTLRSAYNYDAYLTTGSRTSD
FKFVSSYNDNTLPADQTLRKSPSDFAEAFADCDSSPEVGTSYVKLSEQKATHSLF
NT seq
4848 nt
NT seq
+upstream
nt +downstream
nt
atgatggctatcatgagactcacattacaaagctgtgctgttgctttgctgctattttcc
ttgcctcttgtcaatggagatgtaagcttttcttttccggaggagatgaaacgtggatct
gtgatcggaaatatcgccaaagatttgggccttgaaacaagcagactcaccgctcgaaag
gcccgtattgacaccgatgggagcgataaacgttactgtgacttaaacctccgtaacggg
gatctgactgttgccgagaggattgacagggagggcctttgtggagacaaagcatcctgc
gttttaaaacaagaactcatgttagagaatccattagaattgcatagaattagtctgcat
gttaaggacataaatgataactctccgcaattcaacaaagatttgatcgatatagatatt
agtgaatcggcggttaaaggtgctcggtttccaatagaagaagcacatgatgcggatata
ggcacatattcagttcagacgtacaacctccaaagcaatgagcattttattctgggcgtt
ggaactaattctgtgcaacttgtcctcaacaaagagcttgaccgcgaaaacttaaaggaa
atgaatctacttcttacagctctggatggaggttctcctcaaaggtcaggtactgtggtc
attcacatcactgtactcgatgctaatgataacgtgccagtgttcagccaggcagtttat
aaagccagtctgcctgaaaactctccacgaagcactgtcgtgctgacagtgagtgccaca
gatgcagacgagggactaaacggagacgttacatatgattttggacacatttcagaagat
attaagtcgatgtttaccattgatcataagacaggtgaaataaagttgacgactactgtt
gattttgaaatgtcctcatcatttgaactgcgcgtcacagcaaaagatggtttgggatta
acctcttatgccaaagtcatcatagatgttactgatgtaaatgacaacgcccctattata
aacctaaaatccctcacaaatcccatacctgagaatgtgtcacctggtacagaggtgggc
atcattaacgtgcaggatagagactctgagaataacagacaggtccgctgctccattcag
caaaacgtcccttttaagttggttccttctattaaaaactattattctctggtgaccaca
ggacaactggaccgtgaactagtgtctgactacaacattacaatcagtgccactgacgag
ggctctccacctctgtcctcctctaaaactgttcagttatctgtagcagacatcaacgac
aacccacctgtgtttgaggaacagtcgtacagcgcatatgtgagtgaaaataacaaacct
ggctccactttatgttccgttactgctcgagacccagactggagacaaaacggtacagtg
atttattctctgttacccggtgaggtgaacggtgccccggtgtcctcctatctctctgtt
aacggagacacgggggtgatccacgctgtgaggtcgtttgattatgaacagttcaggagt
tttaaagtccacgtgacggccagagacaacggttctcctccgctcagcagcaacgtgacc
gtcagtgtgttcgtatcggatgtgaatgacaactctcctcagatactgtaccccgccccg
gagggcaactccttcatgaccgagctggtccccaaagctgcacacggaggctctctggtg
tccaaagtgatagcagtggacgcagactccggacagaacgcctggctgtcctatcatata
gtcaaatccactgatccgggacttttcactattggtctccacagcggagagatcaggaca
cagcgggacatttctgagtctgacagcatgaaacagaaccttattgtgtcagtgaaagat
aacggacagccctctctctctgccacctgctccatgtatttacttatctctgataacttg
gctgaggtgccagaactgaaggatatttcttatgatgagaagaactccaaactgacctct
tatctgatcatcgcgctggtgtccgtgtccaccttttttctgaccttcatcatcatcatc
ctgggtgtgaggttttgtcgcagtagaaagcccagactgttgtttgatggagcagttgcc
atccccagcgcttatctccctcctacttacgcagatgttgacggcacaggaactttacgc
agcgcttacaattatgacgcctacctgacaacaggttctagaaccagtgactttaagttc
gtgtcatcttacaatgacaacacactgcctgctgaccagactctgaggaaaagtccttct
gactttgttgacccgttcgaagacttagaggcggctgtagaggtaggaacagttaaaaat
atattgatgggagacaaaggattttcagcgctgcggccgatcctctgctttgcttccttt
atcgtaacgctgcagctcgttaatggagacctgagttattctgttccagaagagatgaaa
cgcgagtctgttattggaaatatagccaaagatctcggtcttgatctgaggactttatct
tcccgaaaggcccgtgttgattttgaagggactcgtaaacggtactgtgatattaatctg
agtactggatatttggtcacatcggagagaatggacagagaaagcctttgtggcaagaaa
ccctcgtgtgttgtgaaagtagatctggtgttagaaaatcctctggagcttcatcgtgtc
agtcttcatattcaagatgtaaacgacaactcgccacaattcaacgaagatttgattgaa
atggaaatgagtgagttagctgaaaagggtaaccgcttctctatcgacgaggcccatgac
gcagatataggtcaaaatgctgttcagaggtacagcctacagaaaaacgacaactttatt
ctctctgttgacagcaacaaggttgaactcgtactggagaataaacttgatcgtgaaagg
caacaagatattaatttgctcctcacagctttagatggaggctctcctcagagatcaggt
actgtagtcatacacgtcactgtgctggatgctaatgataacgccccagtgtttagccag
gccgtttataaagccagtctgcctgaaaactctcctccagacaccttagtgattaatgtt
agtgctactgacgcagatgaaggagtgaatggagatgtgacgtatcactttggccatgta
tctgatgataatataaatattttctctattgatcctaaaactggagaaattaaagtaact
ggtgtgatcgactttgaagaaattaattattttgaaatgagaataaaagctaaagatggt
ttaggactaacttcttacgccaaagttataatagatgttactgatgtgaatgataatgct
ccagtgatatatctgaaatcactgactaaccccatacctgagaacgtgtcacctggtaca
gaggtgggcatcattaacgtgcaggatagagactctgagaacaacagacaggtccgctgc
tccattcagcaaaacgtccctttgaagttggttccttctattaaaaactattattctctg
gtgaccacaggacaactggaccgtgaactagtgtctgactacaacattacaatcagtgcc
actgacgagggctctccacctctgtcctcctctaaaactgttcagttatctgtagcagac
atcaacgacaacccacctgtgtttgaggaacagtcgtacagcgcatatgtgagtgaaaat
aacaaacctggcttcactttatgttccgttactgctcgagaccccgactggagacaaaac
ggtacagtgatttattctatgttacccggtgaggtgaacggtgccccggtgtcctcctat
ctctctgttaacggagacacgggggtgatccacgctgtgaggtcgtttgattatgaacag
ttcaggagttttaaagtccacgtgacggccagagacaacggttctcctccgctcagcagc
aacgtgaccgtcagtgtgttcgtatctgatgtgaatgacaactctcctcagatactgtac
cccgccccggagggcaactccttcatgaccgagctggtccccaaagctgcacacggaggc
tctctggtgtccaaagtgatagcagtggacgcagactccggacagaacgcctggctgtcc
tatcatatagtcaaatccactgatccgggacttttcactattggtctccacagcggagag
atcaggacacagcgggacatttctgagtctgacagcatgaaacagaaccttattgtgtca
gtgaaagataacggacagccctctctctctgccacctgctccatgtatttacttatctct
gataacttggctgaggtgccagaactgaaggatatttcttatgatgagaagaactccaaa
ctgacctcttatctgatcatcgcgctggtgtccgtgtccaccttttttctgaccttcatc
atcatcatcctgggtgtgaggttttgtcgcagtagaaagcccagactgttgtttgatgga
gcagttgccatccccagtgcttatctccctcctacttacgcagatgttgacggcacagga
actttacgcagcgcttacaattatgacgcctacctgacaacaggttctagaaccagtgac
tttaagttcgtgtcatcttacaatgacaacacactgcctgctgaccagactctgaggaaa
agtccatctgacttcgctgaagcgtttgcagattgtgattcttctcctgaggtaggaaca
tcatacgtaaagttatcagaacaaaaggctactcattcacttttttag
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