Cottoperca gobio: 115024992
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Entry
115024992 CDS
T07513
Symbol
itgb4
Name
(RefSeq) LOW QUALITY PROTEIN: integrin beta-4
KO
K06525
integrin beta 4
Organism
cgob
Cottoperca gobio
Pathway
cgob04510
Focal adhesion
cgob04512
ECM-receptor interaction
cgob04810
Regulation of actin cytoskeleton
cgob04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgob00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115024992 (itgb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115024992 (itgb4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
115024992 (itgb4)
04810 Regulation of actin cytoskeleton
115024992 (itgb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgob04147
]
115024992 (itgb4)
04515 Cell adhesion molecules [BR:
cgob04515
]
115024992 (itgb4)
04090 CD molecules [BR:
cgob04090
]
115024992 (itgb4)
Exosome [BR:
cgob04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
115024992 (itgb4)
Exosomal proteins of bladder cancer cells
115024992 (itgb4)
Cell adhesion molecules [BR:
cgob04515
]
Integrins
Integrin beta subunits
115024992 (itgb4)
CD molecules [BR:
cgob04090
]
Proteins
115024992 (itgb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Integrin_B_tail
Pur_ac_phosph_N
PSI_integrin
I-EGF_1
EGF_2
SEA
Motif
Other DBs
NCBI-GeneID:
115024992
NCBI-ProteinID:
XP_029312804
Ensembl:
ENSCGOG00000019296
UniProt:
A0A6J2RS56
LinkDB
All DBs
Position
19:complement(20061317..20094835)
Genome browser
AA seq
1939 aa
AA seq
DB search
MGRWTLHLSVRLGLLAVLLTCCYAEVNYCFASRAKSCSECLQSGKGCAYCPDENFNGPRC
DLYKNIISHGCSAAAALTAESSMMIERNQQIDMKLSQSQVSPQQMTMSFLPGEEKLVDVE
VFSPTKGPLDLYILMDFSNSMADDLDNLKAMGKELAKLAKDLSNNFTIGFGKFVDKVIEP
QTDMRKSKLFQPWPNSDPPFSFENVIKLTKDIPFFTSELQKERISGNLDAPEGGFDAILQ
AAVCTNNIGWRDHSTHLLVFSTESAFHYESDGANVLSGILKRNDELCHLDKDDKYTEDVN
QDYPSIPTLVRLLGDHNIIPIFAVTNHSFTYYKKLQQYFPIAEVGLLQEDSANIVQIMKT
AFANIRSKMSIRTQNKPKAFETQFLSSKGSVAQYGEFVVEPGEIGRFKMLVKAQQMVNEQ
PVCQLAQDDKEGIMKVKPTTFNDGVNVKASILCPTCACENTIVSKAARCFGNGDLVCGKC
QCHEGWVSTFCNCSVSTSTNDNSQCIGPGMTEPCSGRGDCLQCGACVCYNPDQFEGPYCQ
YDKTQCQRYGGFLCNDRGSCVMGLCSCTEGWDGEACQCPKSNQTCLDGKGGICNGRGNCV
CGLCECPDSAMEMTSTCEPNFQAQLGVCEATRSCVQCQAWKTGEKKDKEDCAKCPFKIKF
VDKLKEVDKVLDSCDFRDEDDDCTYYYTVENPTDPTVKDLDVQVLKKKDCPPASLLWLLP
FLLFLLLLLALLLLCCWKYCACCKTCCQSCLALLPCCRRGRMVGFKEDEYMLRQSLLTSD
HLDTPMVRTGPPKGTDVVRWKVTDNVHRAPNHPQALIKPNPKETIQFPLSLRLNRLFSEN
LSRPESRDAEQLRKEVSDNLNEVYKQIPGAQKVQKTSFRMQRNAGKRQDYAIMDTVLSAP
RSSYPDIVKLTEKNVQSGNVNDLKVVPGYYTVATDREAAGAVEFQEGVDSVDVHVPLFVK
DEDDDKKQLLVEAMDVPLGIAEIGKRLVHITITKEHATNIFSFLQPAYTYSRQDGVANIP
ISREIIENGRTQVTYRTKDLTAKDKKDYVNVEGDLSYGPDETQKIVPVRLLELNEKDGLL
EEKQVKQFVMDLSNPRQGAKLGRYPRTTVTITDLPEPSVMMFKKGTQNFTTSDPTYTIPV
VRTRNLDGPATVKWRTKKSQRFELAGPLKFNPGEMEKNIVIDPKAHPGSIQPETFQLELF
EPSTNASIGERKTTLVNVGGPNSPEVAQIQQKGFVNPKVTSSGGHLLSPANFKAKATGAR
NIHLNWDPPSGNTLGYKVKYWIYGDPEKEAQVIDVKTPQAELTNLYPCCDYEMRVCGYNA
MGDGYDSDMVACQTLEDVPGEPGRLAFNVISRTVTQVSWGEPAETNGDIMAYEVIYTPID
EDLKPVGTAKKVKIDNPKKRMLLIENLQSAQTYQYKVRAMNSMGWGPFRDATINLASQPA
RPLSIPIIPDIPIVDAEAGDEYDSYLMYSSEVMKSPAGSKTPSVSGEEYTMNGKWDQNFL
FPGGSGTRNLSTSSSPMSTLSSNYRGAGGSYSTETSTTYMMGGMGGGGMGGGGGVHTTEV
IMRKRSENRGYADENIRDSIVMGDVSSKFPDLGGFGYAGMQSSSQSQFSYSLSQGTRART
ESSDVNEALYNLDRVLQDARLSPGVPDTPSRLVFSALGPTALKVSWQEPHCEKDIQGYCV
LYQQLNGGEVQCINVSPAENSVIIQDLLPNHSYLFKVKAQSEEGWGPEREGVITIESAVD
PKSPLNPMPGSPFTLSTPSAPGPLVFTALSPDSLQLSWEKPRKPNGDILGYIVTCEQLHG
GGDVRSFQVNGDSAETSLTVPNLTENVPYKFKVQARTTQGFGPEREGIITIESQDGGDLS
EFNSQSMSRREVFQLPTDVSTRTNVSHTMINDPYFSDGMTMTTQHTESSGMVTRQVTKEV
VQRSVMGGTTVTKKMFYES
NT seq
5820 nt
NT seq
+upstream
nt +downstream
nt
atggggagatggacgttacatctctcagtgcggctcgggcttctcgccgtcctgttgacc
tgctgttacgctgaagtgaactactgcttcgcctccagagccaagtcctgctccgaatgc
ctgcagtcggggaaaggctgcgcatactgtcctgatgagaactttaatggccctcgctgt
gacctgtacaagaatataatcagccacggctgcagcgctgcagctgcgctcacagctgaa
agcagtatgatgatagaaagaaatcaacaaatcgacatgaaactttcgcagtcccaagtg
tctccacagcagatgaccatgagctttctaccgggagaagagaagctggtggatgtggaa
gtgttttctccaaccaaaggccccctggacctttatattctcatggacttctccaactcc
atggctgacgatttggacaacttgaaggctatgggcaaagagctggctaaattggccaaa
gatctgtccaataacttcaccattgggtttgggaagtttgtggataaagtgatcgagccc
cagacggacatgagaaaatccaagctctttcagccgtggcccaacagcgaccctccgttc
tccttcgaaaatgtcatcaagctaacgaaagacattcccttcttcaccagtgagctccag
aaggagagaatatctggcaacctggatgctcctgaaggaggttttgatgccatattgcag
gctgcagtttgtacgaataatatcgggtggcgtgaccacagcacgcatctcctggttttc
tccaccgagtcggccttccactacgagtctgacggcgctaacgtgctgtcaggcatcctg
aagcgcaacgatgagctctgccacctggacaaagatgacaaatacacagaggatgtcaac
caggattacccttcaatacccacactggtccgtttactgggcgaccacaacatcattccc
atctttgctgtcaccaaccactccttcacgtactacaagaaactccaacaatacttcccc
attgctgaggtcggtttgctgcaagaagactcggccaatatcgtgcaaatcatgaagact
gcctttgcgaatatccgttctaagatgagcatccgtacacagaacaaacccaaggccttc
gagacacagttcttgtcctccaaaggaagcgttgcacaatacggggaatttgttgtcgag
cctggagaaataggcaggttcaagatgcttgtgaaagcccagcaaatggtcaatgagcaa
cctgtctgtcagttggctcaagatgacaaagagggaataatgaaggtcaaaccaacgacc
tttaacgatggcgtcaatgttaaggcctcgattttgtgtccaacatgcgcctgtgagaat
actatcgtctctaaggcagccagatgttttggcaacggagacctggtgtgtgggaagtgt
cagtgccatgagggctgggtgagcacattctgtaactgctcagtaagtacttcaactaat
gacaacagccagtgtatcggtccgggcatgacggagccgtgttccgggcgcggtgactgc
ctgcagtgtggagcctgtgtgtgctacaacccggatcagttcgaaggaccgtactgtcag
tacgacaagacccagtgtcagagatacggaggcttcctctgcaatgaccgtggctcttgt
gttatgggtctgtgttcgtgcactgagggctgggacggtgaggcctgtcaatgtcccaag
agcaaccagacctgtctggacggcaagggcggcatctgcaacgggcgaggtaattgtgtc
tgcggcctctgtgagtgtccagactctgctatggaaatgacttcaacctgtgagccaaat
ttccaggcccagttgggcgtgtgcgaggctacgaggagttgcgtccagtgtcaggcgtgg
aagaccggagagaagaaagacaaagaggattgtgcaaagtgcccctttaaaataaaattt
gtggataagctgaaagaagtcgacaaggtgcttgactcgtgtgatttccgtgatgaggac
gacgactgtacgtattactacactgtcgaaaaccctacagatccaacagttaaagacttg
gacgtccaggtgctcaaaaagaaagattgtccccctgccagcctgctgtggttgctcccg
ttcctcttgttcctcttgttactgctggcacttctgctgctctgctgctggaaatactgc
gcctgctgcaaaacctgctgccagagctgtctggcgctgctgccttgctgtaggagaggt
cgcatggttggcttcaaggaagacgagtatatgctccgccagtctctgctcacctcagac
catctggacacaccgatggtgaggaccggcccgcccaaaggaaccgatgtggttcgctgg
aaggtcactgataacgtacaccgggcacccaatcacccgcaggctctgataaagcccaac
cctaaagagaccatccagtttccgctctccctccggctaaacaggttgttctctgagaac
ctgtctcgccccgaatccagagatgccgaacagcttcgcaaggaagtgtccgataacctc
aatgaggtgtacaagcagattcctggcgcccagaaagtgcaaaaaacctcattcaggatg
cagagaaatgctggaaaaaggcaggactacgccatcatggacaccgtcttatctgctcct
cgcagcagctaccctgatatcgtcaaactcactgagaagaatgtccagtctggaaacgta
aatgatctcaaagtggtgcccggctactacactgtggccacagacagagaggctgcagga
gccgtggagtttcaggaaggcgttgattcggtggacgttcacgtgcctctctttgtcaag
gatgaagacgatgacaagaagcagcttctggtggaggccatggatgtgccgctgggcatc
gctgagattggaaaacgtttggtccacatcaccatcaccaaagagcatgccaccaacatc
ttctcgttcctccagccggcctacacctacagcaggcaagacggagtcgccaacatcccg
atcagcagagagatcatagaaaacggacgcacacaggtcacgtaccgtaccaaggacctc
actgccaaggacaagaaggactatgtgaatgtggaaggagacctgagctatggtcccgat
gagacccagaaaattgtgcctgttcgtctgctggagctgaacgagaaagatggcctcctg
gaagaaaagcaggtcaagcagtttgtcatggacctcagtaacccacggcagggcgccaag
ctgggacgctacccgagaactactgtcaccatcacagacctaccagagccaagtgtgatg
atgttcaaaaagggcacacagaacttcaccacatctgacccaacctacaccatccctgtg
gtccgtactcgcaacctggacggccccgccacagtgaaatggcgcaccaagaagtcccag
cgctttgaattagctggccctctaaagttcaatcctggagagatggagaagaacattgtg
atcgacccgaaggcccaccccggctcaatccagccagagacctttcagctggagctgttt
gaaccgagtaccaatgcttctatcggagagaggaagaccactcttgtcaatgtcggaggt
cccaactctccagaggttgcccagatacagcagaaaggcttcgtaaacccgaaagtcacc
tcctctggcggtcaccttctctcgcctgcaaactttaaggccaaagcaaccggagccaga
aacatccacctcaactgggacccaccgtccggtaacaccttggggtacaaggtgaagtat
tggatctatggcgacccagagaaagaggcacaggtcatagatgtgaagacaccccaagct
gagttgaccaacctgtacccctgttgtgactatgagatgagagtgtgcggctacaatgca
atgggagacggctacgattcagacatggttgcgtgccaaaccctggaagatgtgcctggt
gaacccggacgtctggcctttaatgtcatcagtcggactgtcacccaggtcagctggggg
gagcctgcagagaccaatggtgatattatggcttatgaggtcatctacacccccatcgat
gaggatctgaaaccagtgggcaccgctaagaaagtaaagatcgacaaccccaagaagcga
atgctgttgatcgagaacctccagagcgcccagacctaccagtacaaggttcgggccatg
aacagcatgggctggggccccttcagggatgccaccatcaacctggcatcccagcctgcc
agacctctgtccattcccatcattcctgatatccctattgtggatgcggaggcaggagac
gagtatgacagctacctgatgtacagcagtgaggtgatgaagtcccctgcaggctccaag
acacccagcgtctctggtgaagagtacacgatgaatgggaaatgggaccagaacttcctt
ttcccgggggggtcagggacgcgcaacctgtccacatcttcgtctccgatgtccacgctg
agctcaaactacagaggggccggcgggtcctactccacagaaacatccaccacctacatg
atgggaggaatgggaggtggaggaatgggaggtggaggaggtgtacacactaccgaagtc
atcatgaggaagcgctcggagaaccgggggtacgcagatgaaaacatccgagactctatc
gtaatgggagacgtgtcaagcaagttcccagatctcggtggtttcggctacgctgggatg
cagagcagctctcagagccagttcagctacagcctgtctcagggcaccagggcgcggact
gagtcttcagacgtcaatgaagccctttataacctggacagggtgctccaggatgctcga
ctttctccgggtgtaccggacactcccagcaggctggtgttttctgctctgggtcccacg
gccctcaaggtcagctggcaggagccccactgtgagaaggacatccagggctactgtgtt
ctctaccagcagctcaatggaggggaggtgcagtgcattaatgtgagcccagcagagaac
tctgtcatcatccaggacctgctgcccaaccactcctacctgttcaaggtgaaggctcag
agcgaggagggctggggtccggagagagagggagtcattaccatcgagtccgccgtcgac
cccaagagtcccctcaaccccatgccaggctcgccatttactctgagcactcccagtgcg
ccgggcccgctggtcttcacggctctgagccccgattccctgcagctcagctgggagaaa
ccccggaaacccaacggagacatcctgggatacatagtcacctgcgagcagctgcatggt
ggaggagatgtgcgctccttccaggtgaatggggacagtgctgagaccagtctgaccgtc
ccgaacctgacggagaacgtcccctacaagttcaaagttcaggctcggaccacacagggc
ttcggtcctgagagggagggcatcatcaccatcgagtctcaggacggaggcgatttgtct
gagttcaacagccaatcaatgtcgaggagggaagttttccagttgccaacagatgtcagc
acgcggaccaacgtctcccacaccatgatcaacgacccctacttctcagacggcatgacg
atgaccacgcagcacactgagtccagcggcatggtgacccggcaggtcaccaaggaagtg
gttcagaggagcgttatgggaggaaccaccgtcacaaagaagatgttttatgaatcttaa
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integrated database retrieval system
