Chelatococcus sp. CO-6: AL346_19410 Help Entry AL346_19410       CDS       T04040                                  Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism chel  Chelatococcus sp. CO-6 Pathway chel03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:chel00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     AL346_19410  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:chel03400]     AL346_19410 Enzymes [BR:chel01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      AL346_19410 DNA repair and recombination proteins [BR:chel03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      AL346_19410 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol LigD_N DNA_ligase_A_M DNA_ligase_A_C RNA_ligase DNA_primase_S mRNA_cap_enzyme Motif Other DBs NCBI-ProteinID:  ALA19184 LinkDB All DBs Position complement(4152813..4155353) Genome browser AA seq 846 aa AA seqDB search MAEARHLLREYRERRDFTRTAEPDVTAEAGTGEGLLFVVQKHAATRLHYDFRLEWQGVLK SWAVTRGPSLDPADKRLAVRTEDHPLAYGDFEGIIPKGQYGGGTVMLWDRGTWEPVGDPD EGLRRGKLTFRLHGERLSGEWALVRMAPKPGEKRENWLLIKHQEETSGRRRPPDILARHT RSVASGRTMEEIAAGGRTIAPEDVAPKRRARRPAAKAAEKKAGTGGRGGHALPRWVEPQL ATLVDAAPEGGQWLSEMKYDGYRALVAIGGGTCRVYTRNGKDWTDRFPEIAQAASHLDTS GTLIDGEIVAFDEKGKTDFSTLQAALQEGGRGLTFFAFDLLWLDGEDVRGRPLTERKDLL QQLLGEAGPPLIYSTHVVGNASEVNRRLCAAGHEGIIAKRAEDAYRSGRGRSWLKVKCGA RQEFVIGGYRPSDKKGRTVASLLIGVNEGGKLVYKGRVGAFEGDHLARLEQLLASRGRKT SPFTELPRDIARRARFVRPDIVVEVGFTEFTREGAVRHGVLKGIREDKAAREVVLETPRG TAMQEHEARDVIAGIRLSNPDKVLFAEQGVTKADLAAHYERVAGRILPFVSERLLSLVRC PEGAGTQCFFQKHGNKTVARELKRREITESDGERGVYLYVDDLAGLVAGVQMGTLEYHIW GSRIDRLDQPDRLVFDLDPDEGLDFAAVRAAAFDLRERLAALGLQTVPLLTGGKGIHVIA PLVRRADWPMVKAFARGFARLIAGEEPDRYVAQASKAKRAGRIFVDWLRNERGSTAIAPY STRAKKNAPVATPVGWEELRTLDTAQAFTIADMERRLSMPDPWAGEAEGRQAITKTMLGK VGAEEG NT seq 2541 nt NT seq  +upstreamnt  +downstreamnt atggccgaggcgcggcatctcctcagggaataccgggagcggcgggatttcaccaggaca gccgaacccgacgtcacggccgaggccggcaccggcgaggggctgctcttcgtcgtgcag aaacatgccgcgacgcgcctccactacgatttccgcctcgaatggcagggtgttctgaag agctgggcggtgacacgcggcccgagcctcgaccctgccgacaagcggctcgcggtgcgg accgaggaccatccgctcgcctatggcgacttcgagggcatcattcccaagggccagtac ggcggcggcaccgtgatgctgtgggaccgcggcacctgggagcctgtcggcgaccctgac gagggcctgcgccgcggcaagctgacctttcgcctccacggcgagcggctgtcgggcgaa tgggccctcgtgcgcatggcgccgaagccgggcgagaagcgggagaactggctgctgatc aagcatcaggaggaaacctccggccgacgccgcccgccggacatcctggcgcgccatacc cgcagcgtcgcctccgggcgcacgatggaggaaatcgccgctggggggcgcacgatcgcc cccgaggacgtcgcgcccaagcggcgcgcccggcggccggcggcgaaggctgcggagaaa aaggccggcacgggcggccggggcgggcatgcgctgccgcgctgggtggagccgcagctc gccacgctggtcgacgccgcgcccgagggcgggcaatggctgtcggagatgaaatacgac ggctaccgcgccctggtcgccatcggcggcggcacctgccgcgtctatacccgcaacggc aaggactggaccgatcgcttccccgagatcgcgcaggcggccagccatctcgacacgtcg ggcaccctgatcgatggcgagatcgtcgccttcgacgagaagggcaagaccgacttttcc accctgcaggcggcgttgcaggagggcgggagaggactgacgttcttcgccttcgatctc ctgtggctcgacggcgaggacgtccgcgggcgtcccctcaccgagcgcaaggacctgctg cagcagctcctcggcgaggccgggccgccgctcatctattcgacgcatgtcgtcggcaat gcgtccgaggtgaaccggcggctgtgcgcggccgggcacgaggggatcatcgccaagcgg gcggaggacgcctaccgctccggccgcgggcgcagctggctgaaggtgaaatgcggagcg cgccaggagttcgtcatcggcggctacaggccgagcgacaagaagggccgcaccgtcgcc tcgctgctgatcggcgtcaacgagggaggcaagctcgtctacaaaggacgggtgggggcc ttcgagggcgaccatctggcgcggctggagcagctcctcgccagccgcggccgcaagacc tcgcccttcaccgagctgccgcgcgacatcgcccgccgggcccgcttcgtgcgaccggac atcgtcgtcgaagtcggctttactgaattcacgcgcgaaggcgccgtccgccacggcgtt ctgaagggcatccgcgaggacaaggcggcgcgcgaggtggtgctggagacacccaggggg acggccatgcaggagcacgaagcgcgggatgtcatcgccggcatcaggctgtccaacccg gacaaggtgctcttcgccgagcagggcgtgacgaaggccgatctggcggcccattacgag cgcgtggccgggcggatcctgcccttcgtctcggagcgtctcctcagcctcgtgcgctgt cccgagggggccggcacacagtgcttcttccagaagcacggcaacaagaccgtggcccgc gagctcaagcgccgcgagatcaccgagagcgacggcgagcgcggcgtctatctctatgtc gacgatctcgcgggtctcgtcgccggcgtgcagatggggacgctcgaatatcacatctgg ggctcgcgcatcgatcgcctcgaccagccggaccggctggtcttcgatctcgatcccgac gaggggctcgacttcgccgccgtgcgcgccgccgccttcgacctgcgcgagcggctcgcg gcgctcggccttcagaccgtgccgctgctgaccggcggcaagggcatccatgtcatcgcc cccctcgtgcgccgggcggactggccgatggtcaaggccttcgcccgcggcttcgcccgg ctcatcgccggggaagagccggaccgctatgtcgcccaggcctcgaaggcaaagcgcgcc ggccgcatcttcgtcgactggctgcgcaacgagcgcggctccaccgccatcgcgccctat tcgacgcgggcgaagaagaacgcgccggtcgcgacgccggtgggctgggaggaactgcgg accctcgacaccgcccaggccttcaccatcgccgacatggagaggcgcctgtcgatgccg gatccctgggcgggtgaagccgaggggcgccaggcgatcacgaagaccatgctcgggaaa gtgggcgccgaggagggctga

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