Chelatococcus sp. CO-6: AL346_19780
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Entry
AL346_19780 CDS
T04040
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
chel
Chelatococcus sp. CO-6
Brite
KEGG Orthology (KO) [BR:
chel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chel03016
]
AL346_19780
Enzymes [BR:
chel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AL346_19780
Transfer RNA biogenesis [BR:
chel03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AL346_19780
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
PIN
Motif
Other DBs
NCBI-ProteinID:
ALA19246
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Position
4233114..4234259
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AA seq
381 aa
AA seq
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MDLIATTDALAAACARLAKFPFVTVDTEFLRETTYYAKLCLIQMASPAEAVLVDPLAEGM
DLAPFYALMADTEVVKVFHSARQDIEIIWQGGSVIPTPLFDTQVAAMVCGYGDSVSYEQL
VNDLAKARIDKSSRFTDWSRRPLSEQQLAYALSDVTHLRTVYAALHADLAESGRESWLDE
EMAVLTAPATYDTHPEDAWQRLKGRIKKPKEAAVLMEIAAWREREARSRNVPRSRIMKDD
ALIDIAVHAPTTPEALGALRSVPNGFERSRPAGDILAAVARGVARDPKSVSLGERGRKAG
SNGAAIEMLKVLLKAVAENERVAPKILATVDDLEAIALDDEADVPALTGWRRQLFGEKAL
ALKAGRLALTVDRGRVRLVEY
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggacttgattgctacgaccgacgccctcgccgctgcctgtgcacgcctcgccaaattc
cccttcgtcaccgtggataccgagtttctgcgggagacgacgtattacgccaagctctgc
ctgatccagatggcgagcccggcggaggccgtgctcgtcgatccgctggccgagggcatg
gaccttgcgcccttctacgcgctgatggccgacacagaggtggtcaaggtcttccactcg
gcgcggcaggacatcgagatcatctggcagggcggcagcgtcatcccgaccccgctgttc
gacacgcaggtcgccgccatggtctgcggctatggcgactcggtgtcctacgagcagctg
gtcaacgacctcgccaaggcgcgcatcgacaagtcctcccgcttcacggactggtcgcgc
cgcccgctcagcgagcagcagctcgcctatgccctctcggacgtgacgcatctgcgcacc
gtctatgcggcgctgcatgcggacctggccgagagcgggcgcgaaagctggctcgacgag
gagatggcggtgctcaccgcgcccgccacctacgacacccatcccgaggatgcctggcag
cgcctcaaggggcgcatcaagaagccgaaggaagccgcggtgctgatggagatcgcggcc
tggcgcgagcgcgaggctcgcagccgcaacgtgccgcggtcgcgcatcatgaaggacgac
gccctcatcgacatcgccgtgcacgcgccgacgacgccggaggcgctcggcgcgctgcgc
tccgtccccaacggcttcgagcgctcgcggccggccggcgacatcctcgccgccgtcgca
cgcggcgtggcgcgcgatccgaagtccgtcagcctcggcgagcgcggccgcaaggccggc
tccaacggcgccgccatcgaaatgctcaaggtgctgctgaaggccgtggcggagaacgag
cgggtcgccccgaagatcctcgccacggtggacgatctcgaggccatcgccctcgacgac
gaggccgacgtgccggcgctcaccggctggcggcgccagctcttcggggagaaggcgctc
gccctcaaggccgggcgcctcgcgctcaccgtcgaccgcgggcgcgtgcgcctcgtcgaa
tattga
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