Chitinophaga pendula: KTO58_22580
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Entry
KTO58_22580 CDS
T08407
Symbol
ligD
Name
(GenBank) DNA ligase D
Organism
chf
Chitinophaga pendula
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_M
DNA_ligase_A_C
RNA_ligase
DNA_primase_S
mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID:
UCJ06428
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Position
complement(6079864..6082440)
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AA seq
858 aa
AA seq
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MSLSTYRKKRDFSSTAEPTGGKKRSKQHQFVIQRHHATALHYDFRLEVDGILKSWAVPKG
PSLDPQDKRLAMEVEDHPYDYKDFEGTIPAGNYGAGNVYIWDKGTFELLEPKTDNFDKEA
LKDIKAGSLKVILKGKKLKGEFALVKMKGRGERSWLLIKHRDKYAVDGYDSEEHTPQRVK
DKGIQVKEAAKESKKKVHVKKPEATEVKAVTPKRQSGKHKLKAIYRPMLTTLVDAPFDRD
GWIFETKWDGYRAIAAVNKGKVALYSRNQVSFDEVYPPIVAALSNMQHNVVLDGEVVVLD
KQQQSDFQALQNYKTTGKGNLCYVVFDLLHLDGNELQALPLLQRKALLDDLLAQLNDKRI
LFSAHLEHKGLALFKKAQQRGWEGIIAKDGESIYEENRRGNAWLKIKIIQQQEAVICGYT
EPRGSRKQIGALILAVYEKDTLRYVGHCGGGLNTQLIDDLYRQLQPLRRKTSPLQEKVKV
NMPVTWVEPKLVCEVKFSSWTADGILRQPIFMGLRVDKPVKEVHQETAKSLHMGKAKKTA
TSAKEKTSDTAEKERALSLNGHQVALTNQQKIYWPKEKITKGQMIDYYLAVADYLLPHIK
DRPLSLNRFPNGITGASFYQKDLDLATVPGWIKSIPIHSDSSHKDVDYLLCNNAATLAYM
ANLGCIEINPWLSRTRSLDQPDFIVLDLDPEGISFRHVVETALCIKEILDGFGLHHHCKT
SGSSGLHIYIPTGAKYNYDSCRLFAEYVAKQTQRQLPDITSVIRAKSQRKKKVYIDYLQN
SRGQTVAAPYSVRPKPGATVSAPLLWEEVNSSLRISDFDIWNMPDRIKEKGELWKDIRNE
KNDLRKVIRQIEKAPEVE
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaagtacctaccgtaagaagagggatttttccagtactgcagaaccgacagga
ggaaaaaagcgtagtaagcaacaccaattcgtgatacaacgacatcacgcgacggcgtta
cattatgattttcgcctggaagtagatgggatattgaaaagctgggcggtacccaaaggg
ccttcgctggacccgcaggataagcggctggcaatggaagtggaagaccatccttacgat
tataaagactttgagggtactatccctgctggtaactatggtgccggcaatgtatacata
tgggataagggcacatttgaattgctggagcccaagacggataactttgataaagaggcg
ctgaaagacattaaagcaggaagtctgaaagttattctgaaaggcaaaaaacttaaaggg
gaatttgcattggtcaaaatgaagggccgtggggaacggtcctggttgttgatcaaacat
cgggataagtatgctgtggacgggtacgatagtgaggagcatacaccgcagcgtgtgaag
gacaagggtattcaagtgaaagaggccgcgaaggaaagcaaaaaaaaagtccacgtgaaa
aagcccgaagcaacggaggtaaaagcagtaacaccaaaaaggcagtccggaaaacataaa
ctcaaggccatctaccggcctatgctgaccacgttggttgatgcaccctttgaccgggac
gggtggatcttcgaaaccaaatgggacggttatcgtgcgattgctgctgtcaataagggc
aaggtagcgctttactcccgcaaccaggtatcctttgacgaagtttatccgccaatcgtt
gctgcgctttccaatatgcagcataatgtggtattggatggggaggttgtcgtattggat
aaacagcagcaatcggacttccaggctttacagaattacaaaacgacgggcaagggcaac
ctttgctatgtcgtgttcgatctgttacacctggacggtaatgaattgcaagcattgcca
ctattacaacggaaggctttattagatgacttgctggcacagctgaatgacaaacgtata
ttattttcggcgcacctggagcataaagggctagcgctattcaaaaaggcgcagcagcgt
ggatgggaaggaatcatcgcaaaagatggagagagtatatatgaggagaacaggcgtggt
aatgcctggctgaagataaagatcattcagcagcaggaagccgtgatatgtggttatact
gagccaaggggtagccgcaaacagatcggagcgttgatattggctgtatacgagaaggat
acgttgcggtatgtaggtcactgcggcggtggtttgaatacacaattgatagatgatctg
taccggcagctgcaaccactacgccgtaaaacttcgccattacaggaaaaggtaaaggtc
aatatgccggttacctgggtggagcccaaactggtatgcgaggtgaagttttcctcctgg
acggccgatggtatattacgtcagccgatatttatggggttgcgtgtagacaaacctgtt
aaagaagtgcaccaggagactgctaaatcattacacatgggaaaagccaaaaagacggcg
acgtccgccaaagaaaagacatctgatactgccgaaaaggaaagggctctttcgctcaac
ggccatcaggtggcacttacgaatcagcagaagatatactggcctaaagaaaagattact
aaaggtcaaatgatagattactacctggctgtggcggattacttgttgccgcatataaag
gaccggccattaagtctgaatcgttttcccaatggtattaccggcgccagtttctaccaa
aaggatctcgatcttgccacggtgcccggctggatcaaaagcattcctatacactccgat
tccagccataaggatgtagattatctcttgtgtaacaatgcagcaacgcttgcttatatg
gctaacctggggtgcatagagatcaacccctggctgtcgcgtacccgtagcctggatcaa
ccggattttattgtgctggaccttgatccggagggtatttctttccggcacgtggtagag
acggctttatgtatcaaggagatacttgatggatttggtctgcatcatcactgtaagact
tctggctcgtcggggttgcatatatacattcctaccggtgctaaatacaattatgatagc
tgtcgcttatttgctgaatatgtagcaaaacagacacagcgccagctgcccgatattacc
agtgtgatccgtgccaagtcgcagcgtaagaaaaaggtgtatatcgattacctgcaaaat
agcaggggccaaacggtagcggcgccatactcggtacgtccaaaaccaggcgctacagta
tctgctccgttgttgtgggaagaggtaaatagtagtctacgtatcagcgatttcgatatc
tggaatatgccggaccgtattaaagaaaagggggagttgtggaaggatatacgaaatgaa
aaaaatgacctgaggaaggtgatccggcagatagaaaaggcacctgaagtggaatag
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