Colletotrichum higginsianum: CH63R_00109
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Entry
CH63R_00109 CDS
T08176
Name
(RefSeq) Coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
chig
Colletotrichum higginsianum
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
chig04131
]
CH63R_00109
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
chig04147
]
CH63R_00109
Membrane trafficking [BR:
chig04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
CH63R_00109
Exosome [BR:
chig04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
CH63R_00109
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatamer_beta_C
Coatomer_b_Cpla
Cnd1
HEAT_2
Coatomer_g_Cpla
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
28859191
NCBI-ProteinID:
XP_018163446
UniProt:
H1VC60
LinkDB
All DBs
Position
1:complement(340020..343062)
Genome browser
AA seq
956 aa
AA seq
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MASFLENAYSLVHQDNAADIPSLSDLRTQLEKGTDESKVETMKRILTIMLNGDPMPNLLM
HIIRFVMPSKHKALKKLLYFYYEICPKLDSNGKLKQEMILVCNGIRNDLQHPNEYIRGNT
LRFLCKLREPELIEPLLSSARQCLEHRHAYVRKNAVFAVSSIYTHSASLIPDASDLIATF
LEAENDATCKRNAFAALASIDHEKALLYLSTVFEGIPNAEELLQLVELEFIRKDAVQNSQ
NKARYLRLIFDLLEANASTVVYEAASSLTALTNNPVAVKAAAAKFIELSIKEADNNVKLI
VLDRVDQLRKKNEGILDDLVMEILRVLSSPDIDVRRKALDIALEMVSSKNVEEVVLLLKK
ELSKTVDQEYEKNTEYRQLLIHTIHQCAIKFSEVAASVVDLLMDFIADFNNTSAVDVINF
VKEVVEKFPNLRKPIVQRLVATLSEVRAGKVYRGIMWIIGEYSLEERDIRDAWRSIRASL
GEIPILASEQRLLDGDGDEENKEQVNGHSKPAAPTGSRKVLADGTYATETALTSQSAVAA
KLEAVKAAQKPPLRQLILDGDYYLATVLSATLVKLVMRHAEISAESARTNALRGEAMLIM
ISIIRVGQSQFVKAPIDEDSVDRIMSCVRSLSEFTQNKELETVYLDDTRKAFRAMVQAEE
KKKAAKEAVEKAKTAIQVDDVVQIRQLSKKNANDGLDEIEVDLERATGGEATAEDLSSKL
SRVVQLTGFSDPVYAEAYVKVHQFDIVLDVLLVNQTMETLQNLSVEFATLGDLKVVERPT
TQNLGPHDFHNVQCTIKVSSTDTGVIFGNVVYDGAHSTDTNVVILNDLHVDIMDYIQPAT
CTETQFRTMWTEFEWENKVNINSKAKSLRDFLEQLMAATNMNCLTPEASMKGDCQFLSAN
LYARSVFGEDALANLSIEKEGEDGPITGFVRIRSRSQGLALSLGSLKGLNKIGSAA
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctttctggaaaatgcgtacagcttggtgcaccaggacaatgctgccgacatc
ccttccctgtccgacctgcgcacgcagctcgagaagggcaccgatgagagcaaggtcgag
accatgaagcgcattctcaccatcatgctcaacggcgacccgatgcctaacctgctcatg
cacatcatccgattcgttatgccctcgaagcacaaggctctgaagaagctcctgtacttt
tactacgagatctgccctaagcttgactccaatggcaagctcaagcaggagatgatcttg
gtctgcaacggtatcagaaacgacctgcagcaccctaacgagtacatccgaggaaacacg
ctccgtttcctgtgcaagcttagggaacccgagctcattgagcctctgctttcgtccgcg
agacaatgcctcgagcaccgccacgcctacgtccgcaagaacgccgtcttcgccgtctca
tccatctacacacactccgcctccctgatccctgatgcctccgacctcatcgccaccttc
ctcgaagccgagaacgacgcaacatgcaagcgcaacgccttcgccgcgctggcgtccatc
gaccacgaaaaggccctgctctacctgagcaccgtattcgagggtattccgaacgcagag
gaactcctgcagctcgtcgagctcgagttcattcgcaaggatgccgtccaaaactcgcag
aacaaggcgcggtatctcagactcattttcgacctcctcgaagcaaacgcctcgaccgtc
gtgtacgaagccgcttcttcattaaccgccctcaccaacaaccctgtcgctgtcaaggcc
gcggccgccaagttcatcgagctcagcattaaggaggcggacaacaacgttaagctcatc
gtgctggaccgggtcgaccagctgcggaaaaagaacgagggtatcctggacgacttggtt
atggagattctccgcgtcctctccagccccgacattgatgttcgacgcaaggccctggac
attgctctcgagatggtgtcgagcaagaacgtcgaggaggttgtcctcttgctcaagaag
gagctgtccaagaccgtcgaccaggagtacgagaagaacaccgagtaccgtcaactcctc
atccacaccatccatcaatgcgccatcaagttctccgaggttgctgctagcgtcgtcgac
ctgctaatggacttcatcgccgacttcaacaacacctctgccgtcgatgtcatcaacttt
gtgaaggaggtcgtcgagaagttccccaacctgcgcaagcccatcgtccagaggctggtt
gctaccctgagcgaggtgcgcgctggaaaggtgtataggggaatcatgtggattatagga
gaatattccctggaggagcgcgacatcagggatgcgtggaggagcattcgtgccagcctt
ggcgaaatcccgattctcgcttcggaacaacgacttcttgacggtgacggcgacgaggaa
aacaaggagcaggtcaacggccactccaagcccgcggcacccaccggctcccgaaaggtc
cttgccgatggtacttacgctaccgagacggcgctcactagccagtctgctgttgctgcc
aagttggaagccgtcaaggctgcccagaagcctcctctgcgccagctcatcctcgacggc
gactactacctcgcaaccgttctctccgccaccctagtgaagctggtcatgcgccacgct
gagatctctgccgagtccgctcgtaccaatgcacttcggggcgaggccatgctcatcatg
atttccatcatccgtgtcggacagtcgcaattcgtcaaggcccctatcgacgaagactct
gtggaccgcatcatgtcttgcgtgcggtcattgtctgagttcacccagaacaaggaactc
gagactgtttacctcgatgatacccggaaggcgttcagggcgatggtccaggccgaggag
aagaaaaaggctgccaaggaggctgtcgagaaggccaagacagccatccaggtcgacgac
gttgttcagatccgccagctgtccaagaagaacgccaacgatggactggatgagattgaa
gtcgacctggagagggcaaccggcggagaggccaccgcagaggatctgtcatccaagctc
agccgcgttgtccagctgaccggcttctccgaccccgtctacgccgaggcctacgtcaag
gtgcaccagttcgacatcgtcttggacgtgctgctggtcaaccagaccatggagacgctg
cagaacctgtcagtcgagtttgctactcttggtgatctcaaggttgtcgagcgcccgaca
acacagaacctgggtccccatgacttccacaacgtccagtgcactatcaaggtctcgtcc
acggataccggcgtcatcttcggcaacgtcgtctacgacggcgcccactctacggacact
aatgttgtcatcctcaacgatctccacgttgacattatggactacattcagcccgcaacg
tgtaccgagacgcagttccgcacgatgtggaccgagtttgagtgggagaacaaggtcaac
atcaactccaaggccaagtctctccgcgatttcctcgaacagctgatggcagcgaccaac
atgaactgcctgaccccggaggccagcatgaagggcgactgccagttcctgagcgccaac
ctgtacgctcgcagcgttttcggcgaggacgctctggccaacttgagcatcgagaaggag
ggcgaggacggacccatcaccggcttcgtcagaataagaagcagatcgcagggcctggcc
ttgagcctgggttctctcaagggcctcaacaagatcggctcggcggcataa
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