Colletotrichum higginsianum: CH63R_00110
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Entry
CH63R_00110 CDS
T08176
Name
(RefSeq) Mago nashi
KO
K12877
protein mago nashi
Organism
chig
Colletotrichum higginsianum
Pathway
chig03013
Nucleocytoplasmic transport
chig03015
mRNA surveillance pathway
chig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
chig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CH63R_00110
09122 Translation
03013 Nucleocytoplasmic transport
CH63R_00110
03015 mRNA surveillance pathway
CH63R_00110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chig03019
]
CH63R_00110
03041 Spliceosome [BR:
chig03041
]
CH63R_00110
Messenger RNA biogenesis [BR:
chig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
CH63R_00110
Spliceosome [BR:
chig03041
]
Complex C
Other components
EJC/TREX
CH63R_00110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mago_nashi
Motif
Other DBs
NCBI-GeneID:
28859192
NCBI-ProteinID:
XP_018163447
UniProt:
A0A1B7YSA3
LinkDB
All DBs
Position
1:343781..344530
Genome browser
AA seq
173 aa
AA seq
DB search
MTAPTDQFYLRYYSGHSGRFGHEFLEFDFRVLGDGRSAVARYANNSNYRNDSLIRKEMCV
SALIIDEIKRIIKTSEIMKEDDSKWPQKNKDGRQELEIRLGNDHISFEVGDDGFVGISRT
GLTCLVQTAKIGSLVDVTESADPEGLRVFYYLVQDLKALVFSLIALHFKIKPI
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgacggcccctactgatcagttctacctccgatactactctggccattctggacggttc
ggacacgagttcctggaattcgacttccgcgttctcggcgatggaagaagcgcagttgcg
cgttacgcgaacaactccaattaccgaaacgacagcctgattcgcaaagagatgtgcgtc
agcgctcttatcattgacgagatcaagcgcatcatcaagacaagcgagatcatgaaggaa
gacgactccaagtggccacaaaagaacaaagacggacgtcaagaactcgagattcggctg
ggcaacgaccacatttctttcgaggtgggtgacgacggcttcgttggtatctcaagaact
gggctgacatgtctcgtacagaccgctaagattggttcactggtcgacgtgaccgagtcg
gccgaccccgaaggactgcgagtgttctactatctagtgcaggatctgaaggctctggtg
ttcagtctgattgccctgcacttcaagatcaagcccatctaa
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