Chryseoglobus sp. 28M-23: IE160_07095
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Entry
IE160_07095 CDS
T06824
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
chre
Chryseoglobus sp. 28M-23
Pathway
chre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IE160_07095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chre03019
]
IE160_07095
03009 Ribosome biogenesis [BR:
chre03009
]
IE160_07095
Enzymes [BR:
chre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
IE160_07095
Messenger RNA biogenesis [BR:
chre03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IE160_07095
Ribosome biogenesis [BR:
chre03009
]
Prokaryotic type
rRNA helicases
IE160_07095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
HEM4
UvrA_inter
Peptidase_M24
adh_short
Maf_flag10_N
Motif
Other DBs
NCBI-ProteinID:
QOD92734
UniProt:
A0A7L8D1B8
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All DBs
Position
1462652..1464397
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AA seq
581 aa
AA seq
DB search
MTPPENSATTEADSAPTTVPFTELGLSDAVLAALRDVGYEHPSAIQAATIPPLLAGRDVV
GLAQTGTGKTAAFALPILSRLDMAQKTPQALVLAPTRELALQVCEAFEKYAAHLPGVHVL
PVYGGQGYGVQLSALRRGVHIVVGTPGRIMDHLDKGTLDLTALKYLVLDEADEMLKMGFA
EDVETILADTPDDKQVALFSATMPAAIRRISQQHLTNPQEITVKTKTTTSANTSQRYLVV
SYQQKVDALTRILEVENFEGMIIFVRTKNETETLAEKLRARGYSAQAINGDVQQVQRERT
VEQLKSGTLDILVATDVAARGLDVERISHVVNFDIPTDTESYVHRIGRTGRAGRSGAAIS
FVTPRERRLLDAIERATRQPLTQMQLPTVDDVNATRLARFDEAISEALTNGELMGVFRDI
IGHYVEHHDVPEADVAAALAVVAQGGTSLLLTEDDMRPPRMERDDRDARGATRTDRPERG
ERPPRRGNGPALAPYRIEVGRRHRVEPRQIVGALANEGGLSREDFGAIDIKLDFSVVELP
ASMPPATLKKLEATRISGRLIELKPDRGPRKPRTKRPARAD
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgacgcctccagagaactccgccacgaccgaggccgattccgccccgacaaccgtcccc
ttcaccgagctcggcctcagcgacgccgtgctcgccgcgctgcgcgacgtggggtacgag
catcccagtgccattcaggcggcgaccattccgccgctgctcgccggtcgcgacgtcgtc
ggcctcgcccagaccggaaccggcaagaccgccgccttcgccctgccgatcctctcgcgc
ctcgacatggcgcagaagacgccgcaggccctcgtgctcgcccccacccgcgagctcgcc
ctgcaggtgtgcgaggcgttcgagaagtacgcagcccacctgcccggtgtgcacgtgctg
cccgtctacggcgggcaggggtacggcgtgcagctctccgccctgcgccgcggcgtgcac
atcgtcgtcggcacgcccggccgcatcatggaccacctcgacaagggcaccctcgacctc
acggcactcaagtacctcgtgctcgacgaggccgacgagatgctcaagatgggcttcgcg
gaagacgtcgagacgatcctcgccgacactccagacgacaagcaggtcgccctcttctcg
gcgacgatgcccgccgcgatccgccgcatctcgcagcagcacctgaccaacccgcaagag
atcaccgtcaagacgaagacgacgacctcggccaacacgagccagcgctacctcgtggtc
tcctaccagcagaaggtcgacgccctcacgcgcatcctcgaggtcgagaacttcgagggc
atgatcatcttcgtccgcacgaagaacgagacggagacgctcgccgagaagctgcgcgcc
cgcggctactcggcgcaggcgatcaacggcgacgtgcagcaggtgcagcgcgagcgcacg
gtcgagcagctcaagtcgggcaccctcgacatcctcgtggccaccgacgtcgccgcgcgc
ggcctcgacgtcgagcgcatcagccacgtcgtcaacttcgacattcccaccgacaccgag
tcgtacgtgcaccgcatcggccgcacgggccgcgcgggccgcagcggcgccgcgatcagc
ttcgtcacgccgcgcgagcgccggctgctcgacgcgatcgagcgcgcgacgcgccagccg
ctcacgcagatgcagctgccgaccgtcgacgacgtcaacgccacgcgcctcgcccgcttc
gacgaggccatcagcgaggcgctcacgaacggcgagctcatgggcgtcttccgcgacatc
atcggccactacgtcgagcaccacgacgtgccggaggccgacgtggccgccgcgctcgcg
gtcgtcgcgcagggcggcacctccctgctgctcaccgaagacgacatgcgcccgccccgc
atggagcgcgacgatcgggatgcccggggcgccacccgcacggatcgcccggagcgcggc
gagcgaccgccgcgccgcggcaacggccccgcgctcgcgccctaccgcatcgaggtcggc
cgacgccaccgggtcgagccccgccagatcgtcggagcgctcgccaacgagggcggcctc
agccgcgaagacttcggcgcgatcgacatcaagctcgacttctccgtcgtcgaactgccc
gcgtcgatgccgcccgcgaccctcaagaagctcgaggcgacgcgcatcagcggccgcctc
atcgagctcaagcccgaccgcgggccccgcaagccgcgcaccaagcgccccgcgcgcgcc
gactga
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