Capra hircus (goat): 102170165
Help
Entry
102170165 CDS
T02910
Name
(RefSeq) LOW QUALITY PROTEIN: tripartite motif-containing protein 5
KO
K10648
tripartite motif-containing protein 5 [EC:
2.3.2.27
]
Organism
chx
Capra hircus (goat)
Pathway
chx03250
Viral life cycle - HIV-1
chx05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102170165
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
102170165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
chx04121
]
102170165
Enzymes [BR:
chx01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102170165
Ubiquitin system [BR:
chx04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102170165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_5
Gp58
Bacillus_HBL
U-box
zf-Nse
PRY
zf-RING_6
TAN
zf-rbx1
DUF1289
NEPRO_N
Motif
Other DBs
NCBI-GeneID:
102170165
NCBI-ProteinID:
XP_005689857
LinkDB
All DBs
Position
15:34673778..34693652
Genome browser
AA seq
484 aa
AA seq
DB search
MASEKLVNLQEEVTCPICLELLTEPLSLDCGHSFCQICITTNSKESVTGQKGRXKCPVCR
MKYKSGKLRPNWHLANIVQRVREVKLSLQEQEKHLCAHHGEKLLLFCEEDGKVICWLCER
SQEHRGHPTFLMEEVAQEYQKKLQTALERLKQEQQEAEELESDFREEIAAWKNQTRHERQ
NVQAEFEKLRAILDSEETKELQKLKVEETTTLCTMANAENELAQQSQLVRNLISEIEHRL
RGSTMQMLQDVNDILKRSKTLTLKKPNPIPKEQRTVFRAPDLRDILREFSGLRDMQRYWV
DVTVSHTTGNRNIAISADRKQVIYVYKDQRNNRHWEEVDYDCGVLGSPVITSGRHYWEVD
VSEKRAWILGVYGEKADGNHQNVYSTYQPRNGYWVIGLSYDSVYNAFDESSSSYPMILTL
SLSVPPRRIGIFLDYSAGTLLFLNVTNHGFLIYKFSSCSFPQNTFPYFNPMTCKVPMNLC
SPSF
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagaaaaattggtgaacctacaggaggaggtgacctgccccatttgcctggag
cttctaacagagcccctgagccttgactgtggccacagtttctgccaaatctgcattact
acaaacagcaaggagtctgtgactggacaaaaggggcgangaaagtgccctgtgtgcaga
atgaagtataaatctgggaaactgaggcctaattggcacctggccaacatagtgcagagg
gtcagggaggtcaaactgagcctgcaggagcaagagaaacatctctgtgctcaccatgga
gagaaactcctgctcttctgtgaagaggatgggaaggtcatttgctggctttgtgagcgg
tcccaggagcaccgtggtcaccctacatttctcatggaggaggtcgcccaggagtaccag
aaaaaactccagacagctctggagaggctgaagcaggagcagcaggaagctgaggagttg
gagtctgacttcagagaagagattgctgcctggaagaatcaaacacgacatgagagacaa
aatgtccaggcagagtttgaaaaactgagagcaatcctggacagtgaggagacgaaggaa
ctacaaaagctgaaggttgaggagacaaccactctgtgtaccatggcaaacgctgagaat
gagctggcccagcagagccagttggtgagaaatctcatctcagaaatagagcatcgtctg
cggggatcaacaatgcagatgctgcaggatgtaaatgacatcttgaaaaggagtaagact
ttgactctgaagaagccaaacccgattcccaaggaacagagaactgtgtttcgagctcct
gatctgagagacatactgcgagagtttagtgggctgagagatatgcaacgctactgggtt
gacgtgaccgtgagtcatacaacgggtaatcgaaatattgccatttctgctgatcgaaaa
caagtgatatatgtgtacaaagaccaaagaaataatcgacattgggaagaagttgattac
gattgtggtgtcctgggatccccagttatcacatcagggagacattactgggaggtagac
gtgtcagaaaaacgtgcctggatcctgggcgtgtatggtgaaaaagctgatggaaatcat
caaaatgtttactcgacataccaacctagaaatggctactgggtcatagggttaagctat
gattctgtatataatgcttttgatgagtcttcctcctcatatcccatgatcttaaccctc
tccctgagtgttcctcctcgtcgtattgggattttcctagactatagtgctggcacactc
ttatttctcaatgtcacaaaccatggatttctcatttataaattctcttcatgttccttt
cctcaaaacacatttccgtatttcaatcctatgacctgtaaagtccccatgaatctgtgc
tcgccaagcttttga
DBGET
integrated database retrieval system
