Capra hircus (goat): 102177796
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Entry
102177796 CDS
T02910
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
chx
Capra hircus (goat)
Pathway
chx03082
ATP-dependent chromatin remodeling
chx04714
Thermogenesis
chx05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102177796 (SMARCA2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
102177796 (SMARCA2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
102177796 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chx03021
]
102177796 (SMARCA2)
03036 Chromosome and associated proteins [BR:
chx03036
]
102177796 (SMARCA2)
Transcription machinery [BR:
chx03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
102177796 (SMARCA2)
Chromosome and associated proteins [BR:
chx03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
102177796 (SMARCA2)
Chromatin remodeling factors
BAF complex
102177796 (SMARCA2)
PBAF complex
102177796 (SMARCA2)
GBAF(ncBAF) complex
102177796 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
102177796
NCBI-ProteinID:
XP_017907523
EnsemblRapid:
ENSCHIG00000025863
UniProt:
A0A452G579
LinkDB
All DBs
Position
8:complement(42220851..42397963)
Genome browser
AA seq
1572 aa
AA seq
DB search
MSTPTDPGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMPSM
GSADFPQEGMHQMHKPMDGMHDKGVEDIHCGSMKGTAMRPPHPGMGPPQSPMDQHSQGYM
SPHPSPLGAPEHVSSPISGGGPTPPQMPPSQPGPLIPGDPQAMNQPNRGPSPFSPVQLHQ
LRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQQPPPQPQPQPQPQQPQPQQQALVN
YNRPSGPGPELSGPSPPQKLPVPAPSGRPSPAPPAAAPPPAAAVPGPSVPQPAPGQPSPI
LQLQQKQSRISPVQKPQGLDPVEILQEREYRLQARIAHRIQELENLPGSLPPDLRTKATV
ELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLREARMTEKLEKQQKI
EQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHANTEREQKKETERI
EKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVWEHKQAQAAKEKKK
RRRKKKKAEENAEGGESALGPDGEPIDESSQMSDLPVKVTHTETGKVLFGPEAPKASQLD
AWLEMNPGYEVAPRSDSEESDSDYEEEDEEEESSRQETEDKILLDPNSEEVSEKDAKQII
ETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALLINGTLKHYQLQGLEWMVSL
YNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLSTLSNWTYEFDKWAPS
VVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKN
HHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFA
MTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSALQKILY
RHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQHIEESFAEHLGYSNG
VINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDG
TTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQD
RAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQ
AILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRREDARNPKRKPRLMEED
ELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQWLRAIEDGNLEEME
EEVRLKKRKRRRNVDKDPAKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYK
DRCNVEKVPSNSQLEIEGNSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRN
HKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNE
EEEEEDEEESESEAKSVKVKIKLNKKDEKGRDKGKGKKRPNRGKAKPVVSDFDSDEEQDE
NEQSEASGTDDE
NT seq
4719 nt
NT seq
+upstream
nt +downstream
nt
atgtccacacccacagaccctggcgcgatgccccacccggggccttcgccagggccggga
ccctctcctggacccattcttgggcccagtccaggacccggaccatcccccggttccgtc
cacagtatgatggggccaagtcctgggcctcctagtgtctcacaccctatgccgtcgatg
gggtctgctgacttccctcaggaaggcatgcatcagatgcacaagcccatggatggtatg
cacgacaagggggttgaagacatccattgtggatccatgaaaggcactgctatgcgacca
cctcacccaggaatgggccctcctcagagtccgatggatcagcatagccaaggttacatg
tcgccgcacccgtctccgctgggagccccagagcacgtgtccagccctatatcaggaggc
ggcccgaccccaccacagatgccaccgagccagccaggacccctcatcccaggcgaccct
caggcgatgaaccagcccaacaggggtccctctcctttcagtcccgtccagctgcatcag
ctccgagcccagattttagcttacaagatgctggcccggggccagcccctccccgaaaca
ctgcagcttgcagtccaggggaaaaggacgttgcctggcatgcagcaacagccgccgcca
cagccccaaccccagcctcagccgcagcagccacagccgcagcagcaggcccttgttaac
tacaacagaccatctggcccggggccagagctgagcggcccgagccccccgcagaagctg
ccggtgcccgcgcccagcggccggccctcacccgcgccccccgctgcagcgccaccgccc
gcggctgccgtgcccggaccctccgtaccgcagccggccccggggcagccctcgcccatc
ctgcagctgcagcagaaacagagccggatcagcccagtccagaaaccgcaaggcctggac
cccgtggagattctgcaggagcgggagtacagacttcaggctcgcatagcccataggata
caggagctggaaaatctgcctggctctttgccaccagacttacgaaccaaagcaaccgtg
gaactgaaagcgcttcggttactcaatttccaacgtcagctgcggcaggaggtggtggcc
tgcatgcgacgggacacgaccctggagacggccctcaactccaaagcctacaagcggagc
aagcgccagaccctgagggaagcccgcatgacggagaagctggagaagcagcagaagatc
gagcaggagcggaagcgaaggcagaagcaccaggaatacctgaacagtattttgcaacat
gcaaaagacttcaaggaatatcatcggtctgtggctggcaagatccagaagctttccaaa
gcagtggccacctggcacgccaacaccgaaagggagcagaagaaagagacggagcggatt
gagaaggagagaatgcggaggctgatggctgaagatgaagagggctatagaaaactgatc
gatcaaaagaaagacaggcgtttagcatacctcttgcagcagactgatgagtatgtggcc
aacctgactaacctggtttgggagcacaagcaagcccaggcggccaaagagaagaagaag
aggaggaggaagaagaagaaggctgaagagaatgcagaaggaggagagtctgctctggga
ccagatggagagcccatagacgagagcagccagatgagtgacctccccgtcaaagtgact
cacacagaaactggcaaggtcctgtttggcccagaagcacccaaagcaagtcagctggac
gcctggttggaaatgaatcctggttacgaagttgcccctagatcggacagtgaagagagt
gattctgattatgaggaggaggatgaggaggaagagtccagcaggcaggaaactgaagat
aaaatacttctggatccaaacagcgaggaggtttcggagaaggacgccaagcagatcatc
gagacagctaagcaagatgtggacgacgagtacagcatgcagtacagtgccagaggctcc
cagtcctactatacagtggcccacgccatctccgagagagtggagaagcagtcagccctc
ctcattaatggaaccctgaagcattatcagctccagggcctggaatggatggtttctctg
tataataacaatttgaatggaatcttagctgatgaaatggggctgggaaagaccatacag
accattgcactcatcacttatctgatggagcacaaacgactcaatggcccctatctcatc
attgttcccctttcgactctatctaactggacgtatgaatttgacaaatgggctccttct
gtggtgaaaatttcttacaagggcacccctgccatgcgtcgctctcttgtcccccagcta
cggagtggcaaattcaacgtcctcctgactacttatgagtacattataaaagacaagcac
attcttgcaaagatccggtggaaatacatgatagtggacgaaggccaccgaatgaagaat
caccactgcaagctgactcaggtcctcaacacgcactacgtggcccccagaaggatcctc
ctgaccgggaccccactgcagaataagctcccggaactctgggccctcctcaacttcctc
ctccccaccatttttaagagctgcagcacattcgagcagtggtttaatgcgccgtttgcc
atgactggagagagggtggacttaaatgaagaagaaactatattgatcatcagacgtctg
cataaggtgctgagacccttcctactgaggaggctgaagaaagaagttgaatctcagctt
ccagaaaaggttgagtatgtgatcaagtgtgacatgtcagctctgcagaagattctgtat
cgccacatgcaagccaaagggatcctcctcacagatggttcagagaaagataagaagggg
aaaggcggtgctaagacactaatgaacaccatcatgcagttgagaaagatctgcaatcac
ccatatatgtttcagcatattgaggaatcctttgctgaacacctgggctattcaaatggg
gtcatcaatggggctgagctgtatcgggcctcgggaaagtttgagctacttgatcgtatt
ctgccaaaattgagagcgactaaccaccgcgtgctgcttttctgccagatgacgtccctc
atgaccatcatggaggattactttgcttttcggaacttcctttatctgcgccttgatggt
accaccaagtctgaagatcgtgctgctttgctaaagaaattcaatgaacctgggtcccag
tatttcattttcttgctgagcacaagagctggaggcctgggcttgaatctccaggctgct
gatactgtggtcatctttgacagcgactggaatcctcatcaggacctgcaggcgcaggac
cgcgctcaccgcattggccagcaaaacgaggtccgcgtgctgagactctgcactgtcaac
agcgtggaggagaagatcctcgccgccgccaagtacaagctgaatgtggatcagaaggtg
atccaggcgggcatgtttgatcagaagtcttccagccatgagcggagggccttcctgcag
gccatactggagcacgaagaggaaaatgaggaagaagatgaagtgcccgacgatgagact
ttaaaccaaatgattgctcgacgagaggaggaatttgatctttttatgcgcatggacatg
gaccggcggagagaggatgcccggaaccccaaacgcaagccccgcctgatggaggaagac
gagctgccctcgtggattattaaagatgacgccgaggtggaacggctgacgtgtgaagag
gaggaggagaagatcttcgggagggggtctcgccagcggcgggacgtggactacagcgac
gccctcacggagaagcagtggctgagggccattgaagacggcaatttggaagaaatggaa
gaggaagtccggcttaagaagcgaaaaagacgaagaaacgtggataaagatcctgcaaaa
gaagatgtggagaaggccaagaagaggagaggtcgccctccagctgagaagctgtcacca
aatccccctaaactgacgaagcagatgaatgctatcattgacactgtgataaactacaaa
gacaggtgtaacgtggagaaggtgcccagtaattctcagttggaaatagaaggaaacagt
tcagggcgacagctcagcgaagtcttcattcagttaccttcaagaaaagaattaccagaa
tattatgaattaattaggaaaccggtggatttcaaaaaaataaaggaaagaattcgtaat
cataagtaccggagcctgggtgacctggagaaagacgtcatgctcctctgtcacaatgct
cagacattcaacttggagggatcccagatctatgaagactccatcgtcttacagtcagtg
tttaagagcgctcggcagaaaattgccaaagaggaagagagtgaggacgaaagcaatgaa
gaggaggaggaggaagatgaagaagagtcagagtcagaggcaaaatctgtgaaggtgaaa
atcaagctcaataaaaaggatgagaaaggccgggacaaaggaaaaggcaagaaaaggcca
aaccgaggaaaagccaagcctgtggtgagcgattttgacagcgatgaagagcaggatgaa
aatgaacaatcagaagccagtgggaccgatgatgagtga
DBGET
integrated database retrieval system
