Capra hircus (goat): 102190136
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Entry
102190136 CDS
T02910
Symbol
PNPT1
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial isoform X1
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
chx
Capra hircus (goat)
Pathway
chx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102190136 (PNPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chx03019
]
102190136 (PNPT1)
03016 Transfer RNA biogenesis [BR:
chx03016
]
102190136 (PNPT1)
Enzymes [BR:
chx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
102190136 (PNPT1)
Messenger RNA biogenesis [BR:
chx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
102190136 (PNPT1)
Transfer RNA biogenesis [BR:
chx03016
]
Prokaryotic type
tRNA degradation factors
102190136 (PNPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
PNPase
S1
RST
Motif
Other DBs
NCBI-GeneID:
102190136
NCBI-ProteinID:
XP_005686683
EnsemblRapid:
ENSCHIG00000025034
LinkDB
All DBs
Position
11:complement(37919279..37959675)
Genome browser
AA seq
784 aa
AA seq
DB search
MAACRHCCSCLRLRPLGDGPLRLPGRDRTLTQLQVRALWGGIGPRSVAVDLGSRKLEISS
GKLARFADGSAVVQSGDTAVMVTAVSKTKPSPSQFMPLVVDYRQKAAAAGRIPTNYLRRE
IGSSDKEILTSRVIDRSIRPLFPAGYFYDTQILCNLLAVDGVNEPDVLAINGASVALSLS
DIPWNGPIGAVRIGMIDGECVVNPTRKEMANSTLNLVVTGAPKSQIVMLEASAENILQQD
FCHAIKVGVKHTQQIIQGIQQLVKENGVTKRTPQKLFVPSPEIVKHAHKLAMEKLYTVFT
DHEHDKISRDEAINKIRLDTEEQLKEKFPEVDSCEIIESFNVATKDVFRSIILNEYKRCD
GRDLTSLRNINCEVDMFKILHGSSLFQRGQTQVLCTVTFDSLESNFKSDRIITAINGIKD
KNFMLHYEFPPYATNEIGKVTGINRRELGHGALAERALYPVIPKDFPFTIRVTSEVLESN
GSSSMASACGGSLALMDAGVPISSAVAGVAIGLVTKNNPDKGEIEDYRLLTDILGIEDYH
GDMDFKIAGTSKGITALQADIKLPGIPIKIVMEAIQQASVAKKEILQIMNKTISKPRASR
KENGPVVETVQVPLSKRAKFVGPGGYHLKKLQAETGVTISQVDEETFSIFAPTPSAMHEA
RDFITDICKDDQEQQLEFGAVYTATITEIRDTGVMVKLYPNMTAVLLHNTQLDQRKIKHP
SALGLEVGQEIQVKYFGRDPADGRMRLSRKVLQSPATTVVKTLNDRSSIVMGESVSQSSS
NSSR
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctgcaggcattgctgctcgtgcctccggctgcggcctctgggcgatggtccc
ctccgtctgccagggcgggataggacactcacccagttacaggtgcgagcactatggggt
ggcatcgggccgcgatccgtggccgtggatttaggcagcagaaaattagaaatatcctct
ggaaaactggccagatttgcagatggctctgctgtagtacagtcaggtgacactgcagtg
atggtcacagcagtcagtaaaacaaaaccttcaccttcccaattcatgcctttggtggtt
gactatagacagaaggctgctgcagcaggtaggattcccacaaactatctcagaagagag
attggatcttctgataaagaaattcttacaagtcgagtaatagatcgttcaattagacct
ctctttccagctggctacttttatgatacacagatcctttgtaatctgttagcagtagat
ggtgttaatgaacctgatgtcctagcaattaatggtgcttctgtagccctctcattatca
gatattccttggaatggacctattggggcagtacggataggaatgattgatggagaatgt
gtagttaacccaacacgaaaagaaatggctaacagtactttaaatttagtggttactgga
gcacctaaaagtcagattgtcatgttggaagcctctgcagagaatattttacagcaggac
ttttgccatgctatcaaagtgggagtaaaacatacacaacaaataattcagggcatccag
cagttggtaaaagaaaatggtgttaccaagaggacacctcagaagttattcgtcccttca
ccagagattgtcaaacacgctcataaactcgccatggaaaaactctacacagtttttaca
gatcatgaacatgataaaatttccagagatgaagctattaataagattagattagataca
gaggaacaactaaaagaaaaatttccagaggttgattcctgtgaaataatagaatccttc
aatgttgctacaaaggatgtttttagaagtattattttgaatgagtacaaaaggtgtgac
ggtcgagatttgacttcacttaggaatataaattgtgaggtagatatgtttaaaattctt
cacggatcgtcattatttcagaggggacagacacaggtgctttgtactgttacatttgat
tcattagaatccaattttaagtcagaccgaattataacagctataaatgggataaaagat
aaaaatttcatgctgcactatgagtttcctccctatgcaactaatgaaattggcaaagtc
actggtataaatagaagagaacttgggcatggtgctcttgctgagagagctctgtatccc
gttattcctaaagattttcctttcaccataagagtcacatcggaagtactagagtcaaat
gggtcatcttctatggcatccgcatgtggtggaagtttagccttaatggatgcaggagtt
ccaatttcatctgctgtggcaggtgtggcaataggattggtcaccaaaaacaatcctgac
aaaggtgaaatagaagactatcgtttgctgacagatattctggggattgaagattaccat
ggtgacatggatttcaaaatagctggcacttctaaaggaataactgcattgcaggctgac
atcaaattacctggaataccaataaaaattgtaatggaggccattcagcaagcctcagtg
gcaaaaaaggagatattacagataatgaacaaaactatttcaaaacctcgagcatctaga
aaagaaaatggacctgttgtagaaactgttcaggttccgttatcaaaacgagcaaaattt
gttggaccgggtggatatcatttaaaaaaacttcaggctgaaacaggagtcactattagc
caggtagatgaagaaacattttctatctttgcaccaacacctagtgccatgcatgaagca
agagacttcattactgatatctgcaaagatgatcaagagcagcagttagaatttggagca
gtgtacactgccacaataactgaaatcagagacactggagtaatggttaaactctatcca
aatatgactgcagtactgcttcacaacacacaacttgatcaacgaaagattaaacatccc
agtgctttaggattagaagttggccaagaaattcaggtgaaatactttggacgtgatcca
gctgatggaagaatgaggctttctcgtaaagtgctccagtctccagctacaactgttgtc
aaaactttaaatgacagaagtagtattgtaatgggagaatctgtttcacagtcatcatct
aattcttcccggtga
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