Capra hircus (goat): 108635080
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Entry
108635080 CDS
T02910
Name
(RefSeq) collagen alpha-1(III) chain-like
Organism
chx
Capra hircus (goat)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
108635080
NCBI-ProteinID:
XP_017900864
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Position
Unknown
AA seq
1280 aa
AA seq
DB search
QTPADEAPASGEERRRRDVCRASGGSPAEAKRSTQLVRLLAVDHSARHIDHRHFERTCGP
GFLPGLRLSERRLPINRPSGVRAGGCPRRARRALRPPKCRHGRPPEGSVAAGEIAAREKG
EGDRELAPRPLARRAFWGRSSPPPGSASSRRKRPLGVAAVGGGSGVGDGLAPRGGGGPAG
VAGVGVASSGPPGRRPPLPHARGASPGRRASAARARFPATPPAALAPSGGRFAPEAGSAC
ASAPRGRVPRRRPAGRRGVCPPLRALPPGCGRAAVRAPELPPRGGAGAGAGGDRGPRGAS
VARSGFGARACPDPLPRVHLSAVPRPVRPVAAVRPEDSTRRRARPCRRPGGSFPLPVPPD
PSTRPPSAPRRSPPSASGRAAGGGGGSRGWAGGAGGGAGGGPPPGRRPGAAGRISTAAVR
RDRLRDGWEGPAGKVARGAPPPSRGGGGPALPGCYSPAGSSARRIPGPREPALVAALSPL
PALPPPPRGSRSREGGVPRGGARRGLFPGGAGPPLPRRREPLSATPARLPPFAGRGWGRG
GADCPQCAPGGSRRRARGVASRGEPQERRASARVRGDVPRPRRTGSRARSARRPPSWVSR
PHRRRGSPSPPPEPAVDRPHRRGPRALARVPAVLPETRPPGPDGATRPGALGTVRPAPTP
PPPPRRGGRRAGVGERSRRGRGGPAPGKRPRRAPPRGTPPRGSGTPAGGGAPGGGRARRR
GLAPSAPGFGERCCRRGCNTRGGRARRRRETAAGPPRATFPAGPSQPSRSRSRRTAAVEM
RPAAPGRRPGGGPPPAPPPAPPAHPRDPPPPPAARPEADGESGEGRREGGWRGREARGAG
KIRRAAGTAGPAAGLNPPGGLLRWSLPPALGCIPKQPDSGKTRARRAGGRYRPHTVHGLG
LDQKDLGPPRAAPGSGSSRVATSDLRSRLGGPEGGGEGAREEGPEKGETRRPAADRPGPP
ASPRTRGTPTDRPPPRPDYPSPLREEEAAASAAAAAAGGGRRGRGRGGAGSTSRLPRDGR
GAGRRRAGRGGEGRGTRGRRSPNGRRTHRAAPISPGPRHRPRPRGGSSGARTAARPQPGG
RARSGGQTPRRPAGRRRGTRPRGADAHADPASGANRPSRRGESRGGAWPGSGHGPRTHGG
RGRHRGRGGGGGAGRADRKTRPPPPPPPRGPRHPVARDRPRPPTPPPGAATPRGRLRREE
ALPEGGRPTPEGPAGQGPRRELAVPFSLLAGGSLPRGRRAFGGTPCLHLGGRRARRALRG
QPPAAHPGGAIDRQATLRQA
NT seq
3844 nt
NT seq
+upstream
nt +downstream
nt
gcaaacccccgccgacgaagctcccgcctccggggaggagcggcggcggcgggacgtgtg
ccgtgccagcggcgggtctcccgccgaagcgaaacgctcgacgcagctcgtacgactctt
agcggtggatcactcggctcgacacattgatcatcgacacttcgaacgcacttgcggccc
cgggttcctcccggggctacgcctgtctgagcgtcgcttgccgatcaatcgcccctccgg
ggtgcgcgctgggggctgtcctcgcagggcccgccgggccctccgtccccctaagtgcag
acacgggcgtccccccgaaggctctgtggccgcgggggagattgccgcccgcgagaaggg
agaaggggaccgcgagctcgcgccgaggcccctggcccgccgggccttctggggtcggtc
ctcccccccccccgggagcgcctcctcgcgccgcaagcggcctctgggtgttgccgccgt
cgggggggggtcgggggtcggggacggtctcgcgccacggggtggcgggggccccgcggg
ggtggcgggggtgggggtcgcgtcttccggtccgcccggccggcgcccccctctccccca
cgcccgcggtgcctcccccggccgccgtgcgtccgcggcccgtgcccgcttcccggccac
gccccccgcggctctcgccccgtcgggcgggcggttcgcgcccgaggccgggtccgcgtg
cgcgtccgcgccccggggacgcgtgcctcggcggcgacccgcgggacgccgcggcgtctg
cccgccgctgcgcgctctccccccgggctgcggccgtgccgcggttcgcgccccggagct
cccgccgcggggcggggcgggggcgggggccgggggagatagggggccgcgcggtgcgtc
cgtcgcccgttcgggcttcggtgcccgcgcgtgccccgaccctctcccccgcgtccacct
ctccgccgtcccgcgccccgtccgtcccgtggcagccgtccgcccggaggattcaacccg
gcggcgggcccggccgtgccggcggcccggcggatctttcccgctccccgtgcctcccga
cccctccacccgccctccctccgcccctcgccgctctcccccgtccgcctccgggcgggc
ggcgggcggcggcggggggtcgcgggggtgggcgggcggggccgggggtggggccggcgg
gggaccgccccccggccggcgaccgggcgccgccgggcgcatttccaccgcggcggtgcg
ccgcgaccggctccgggacggctgggaaggcccggcggggaaggtggctcggggggcccc
gccgccgtctcgcggcggcggcgggcccgccctccccgggtgttacagccccgccggcag
cagcgctcgccgaatcccggggccgagggagccagccctcgtcgccgcgctctcccccct
cccggcgctccccccccccccgcgggggtcccgctcccgcgaggggggcgtcccccgcgg
gggggcgcgccggggtctcttcccggggggggccgggccgcccctcccacggcggcgcga
accgctctccgccaccccggcccgcctcccccccttcgcggggcgggggtggggtcgggg
cggggcggactgtccccagtgcgccccgggcgggtcgcgccgtcgggcccggggggtcgc
gtctcggggagaaccgcaggaacgccgagcgagcgcacgggtccgcggcgatgtccctcg
cccgcgccggaccggctcacgtgcgcgatcagctcgccgaccgccgtcctgggtgagccg
ccctcaccggcgccgaggttcgccgagccctccgcccgagcccgccgtcgaccgcccgca
tcgccgcggaccccgtgcgctcgctcgcgttcctgcggttctccccgagacgcgaccccc
cgggcccgacggcgcgacccgcccgggcgcactggggacagtccgccccgccccgacccc
acccccgcccccgcgaaggggggggaggcgggccggggtgggagagcggtcgcgccgtgg
gaggggcggcccggcccccgggaagagaccccggcgcgcccccccgcgggggacgccccc
tcgcgggagcgggacccccgcgggggggggagcgccgggaggggggagagcgcggcgacg
agggctggctccctcggccccgggattcggcgagcgctgctgccggcggggctgtaacac
ccggggagggcgggcccgccgccgccgcgagacggcggcggggcccccccgagccacctt
ccccgccgggccttcccagccgtcccggagccggtcgcggcgcaccgccgcggtggaaat
gcgcccggcggcgcccggtcgccggccggggggcggtcccccgccggccccacccccggc
cccgcccgcccacccccgcgaccccccgccgccgcccgccgcccgcccggaggcggacgg
ggagagcggcgaggggcggagggagggcgggtggaggggtcgggaggcacggggagcggg
aaagatccgccgggccgccggcacggccgggcccgccgccgggttgaatcctccgggcgg
actccttagatggagtttaccacccgctttgggctgcattcccaagcaacccgactccgg
gaagacccgggcccggcgcgccgggggccgctaccggcctcacaccgtccacgggctggg
cctcgatcagaaggacttgggccccccacgagcggcgccggggagtgggtcttcccgggt
cgccacgtctgatctgaggtcgcgtctcggagggcccgagggagggggcgagggagcccg
cgaggaggggcccgagaagggggagacgcggaggcccgcggccgaccgccccgggccccc
cgcttccccgcgcacacgcggcaccccgaccgaccgaccccccccccgccccgactaccc
gtcgcccctccgggaggaggaggcggcggcgtcggcggcggcggcggcggccggcggcgg
gcggagagggaggggccgaggcggggcggggagcacgagccggctgccacgggacggacg
gggcgcgggacggcggagagctggacgcgggggagagggtcggggcacgcgcgggcgccg
aagcccgaacgggcgacggacgcaccgcgcggcccctatctcccccggcccccgccaccg
cccccgccctcgcggcgggagctccggggcgcgaaccgcggcacggccgcagcccggggg
gagagcgcgcagcggcgggcagacgccgcggcgtcccgcgggtcgccgccgaggcacgcg
tccccggggcgcggacgcgcacgcggacccggcctcgggcgcgaaccgcccgtcccgacg
gggcgagagccgcgggggggcgtggccgggaagcgggcacgggccgcggacgcacggcgg
ccgggggaggcaccgcgggcgtgggggaggggggggcgccggccgggcggaccggaagac
gcgacccccacccccgccacccccgcggggcccccgccaccccgtggcgcgagaccgtcc
ccgacccccgaccccccccccgggggcggcaacacccagaggccgcttgcggcgcgagga
ggcgctcccagaggggggaaggccgaccccagaaggcccggcgggccaggggcctcggcg
cgagctcgcggtccccttctccctgctcgcgggcggcagtctcccccgcggccgcagagc
cttcggggggacgccgtgtctgcacttagggggacggagggcccggcgggccctgcgagg
acagcccccagccgcgcaccccggaggggcgattgatcggcaagcgacgctcagacaggc
gtag
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