Clostridium isatidis: BEN51_05290
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Entry
BEN51_05290 CDS
T05663
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
cia
Clostridium isatidis
Pathway
cia03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BEN51_05290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cia03019
]
BEN51_05290
Messenger RNA biogenesis [BR:
cia03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BEN51_05290
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
OmpH
CMV_1a
KH_2
FUT8_N_cat
Serinc
FeoB_associated
Motif
Other DBs
NCBI-ProteinID:
ASW42902
UniProt:
A0A343JBJ4
LinkDB
All DBs
Position
complement(1126593..1128134)
Genome browser
AA seq
513 aa
AA seq
DB search
MEILIKIIVGIIVLAVICLILYNAIKSASKKKIERLEREAFEILENAKKEAEAIKKESIL
EAKEEVHKLRNDLDKECRERRNEVQRLERRIIQREETLDKKSDFLEKKEESLNKRLQEIN
DLEASVQELYAKRREELERISAMTSEEAKEILLSEVKREITHETAMMIKDVEARAKEEAE
KKAREIITTAIQRCAADHVSESTVHVVALPNDEMKGRIIGREGRNIRTLETLTGVDVIID
DTPEAVILSSFDPVRREIAKIALEKLIVDGRIHPARIEEMVERATKDVENDIKEEGEQAT
LEVGVHGVHPEIIKLLGRLKYRTSYGQNVLKHSIEVAYLAGIMASELGLDVNLAKRAGLL
HDIGKVATKEDEGRHAVIGGDLAKKYGESPIVANAIAAHHGDVEMLTLEAVLVQAADAIS
AARPGARRETLEAYIKRLEKLEEIANSYEGVEKSYAIQAGREIRIMVKPDQLDDAGIVEL
ARDLSKSIEQNLEYPGQIKINVIRETRAVDYAK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggaaattcttataaaaattatagttggaattattgtattggcagttatatgtcttata
ctttataacgctataaagagtgcatctaaaaagaagattgaaaggttagaaagagaagct
tttgaaattttagaaaatgctaaaaaagaagcagaagctattaagaaagaatctatttta
gaggcgaaagaagaagttcataaattaagaaatgatctagataaagagtgtagagaaaga
agaaatgaagtccaaaggcttgaaagaagaataattcaaagagaagaaacattagataag
aaaagtgattttttagaaaagaaagaagaatctttaaataaaaggttacaagaaatcaat
gatctggaagctagtgtgcaagaactttacgctaaaagaagagaagaacttgaaagaata
tcagcaatgacttctgaggaagctaaagaaattcttttaagtgaagtaaaaagagaaata
acacatgaaactgctatgatgattaaagatgttgaagcaagagctaaggaagaagcagag
aaaaaagcaagagaaattataactactgcaattcaaagatgtgcagcagatcatgtatca
gaatcaacagtgcatgttgttgcccttccaaatgatgaaatgaagggaagaattataggt
agggaaggtagaaatatcagaaccctagaaacattaacaggagtagatgtaattatagat
gatactccggaagcagttattttatcaagttttgatcctgtaaggagagaaattgctaaa
atagccttagaaaagttaattgtagatggaagaattcacccagctagaatcgaggaaatg
gtagaaagagctaccaaggatgttgaaaatgatattaaagaagaaggagaacaagcaacc
cttgaagtaggtgttcatggtgttcatcctgaaattattaaattacttggtagactaaag
tatagaactagttatggacaaaatgtgttaaaacattctattgaggttgcttatttagca
ggtattatggcttcagaacttggtttagatgtaaatttagccaagagagcaggcttatta
catgatataggcaaagtagcaacaaaagaagatgaaggtcgtcatgccgtaattggcgga
gatttagctaagaaatatggagaatctcctattgttgccaatgcaattgcagcccatcat
ggagatgttgaaatgttaacattagaagccgtattagttcaggcagcagatgctatatca
gctgcaaggccaggggcaagaagagaaaccctagaagcatacattaagagattagaaaag
cttgaagaaattgcaaattcttatgaaggtgtagaaaaatcatatgcaattcaggctggt
agagagataagaattatggttaaaccagatcaattagatgacgctggaatagtagaatta
gctagagatttatctaagagtatagaacaaaatttagaatatccaggtcaaattaaaatt
aatgttataagagaaacaagagcagttgattacgctaaataa
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