Citrobacter sp. TSA-1: HF677_002735
Help
Entry
HF677_002735 CDS
T09275
Symbol
garD
Name
(GenBank) galactarate dehydratase
KO
K01708
galactarate dehydratase [EC:
4.2.1.42
]
Organism
cib
Citrobacter sp. TSA-1
Pathway
cib00053
Ascorbate and aldarate metabolism
cib01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
HF677_002735 (garD)
Enzymes [BR:
cib01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.42 galactarate dehydratase
HF677_002735 (garD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GD_AH_C
GD_AH_second
SAF
Motif
Other DBs
NCBI-ProteinID:
QKE18639
LinkDB
All DBs
Position
complement(564938..566509)
Genome browser
AA seq
523 aa
AA seq
DB search
MADIEIRQKSPTAFYIKVHETDNVAIIVNDNGLKAGTRFPDGLELIEHIPQGHKVALLDI
PVRGEIVRYGEVIGYAVRDIPRGSWIDESMVELPKAPPLETLPLATKVPEPLPPLEGYTF
EGYRNADGSVGTKNLLGISTSVHCVAGVVDYVVKIIERDLLPKYPNVDGVVGLNHLYGCG
VAINAPAAIVPIRTIHNIALNPNFGGEVMVIGLGCEKLQPERLLEGTHDVKSIPVDSASI
VSLQDDKHVGFQSMVADILQVAEHHLAKLNQRQRETCPASELVVGMQCGGSDAFSGVTAN
PAVGYASDLLVRCGATVMFSEVTEVRDAIHLLTPRAINEEVGKRLLEEMAWYDNYLDMGK
TDRSANPSPGNKKGGLANVVEKALGSIAKSGKSAIVEVLSPGQRPTKRGLIYAATPASDF
VCGTQQVASGITVQVFTTGRGTPYGLMAVPVIKMATRTELANRWFDLMDINAGTIATGEE
TIEDVGLKLFEFILDVASGRKKTFSDQWGLHNQLAVFNPAPVT
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggccgacatcgaaatcagacaaaaatcgccaacggcgttttatattaaagttcacgaa
acagataatgtggcgataattgtcaatgacaatggtctgaaagctgggacgcgttttcca
gacggactggaactcattgaacatattccccagggacataaagtggcgctcttggatatt
cctgttcgcggcgaaatcgtgcgttatggcgaagtgataggctatgccgttcgcgatatc
ccacgcggcagttggattgatgaatcaatggttgagctacccaaggccccgccgttggag
acgctgccgctggcaaccaaagtgccagagccgctgccgcctcttgagggttacaccttc
gaaggttatcgcaatgcggacggtagtgtcggcaccaagaatttgctcggtatttccacc
agcgtgcactgcgtggcgggcgtggtggattatgtggtgaaaatcattgagcgcgatctg
ctgcccaaatacccgaacgttgacggcgtggtcggactcaatcatctgtacggctgcggc
gtggcgattaatgccccagccgccatcgtgccgattcgtaccattcacaatattgcgcta
aacccgaactttggcggtgaagtgatggtcattggcctcggctgcgaaaaactgcagcca
gagcgcctgctggaaggcacgcacgatgtgaaaagtattccggtcgacagcgccagcatc
gtcagcctgcaggatgataaacacgttggctttcaatcgatggttgccgatattttgcag
gtggctgaacaccatctggcaaaactcaatcaacgccagcgtgaaacctgcccggcatca
gaactggtggtcggcatgcagtgcggcggcagcgatgcgttttcaggcgtgacggccaac
ccggcggtcggttatgcctccgacctgttagtacgctgcggcgccaccgtaatgttctct
gaggttaccgaagtgcgcgatgccatccatcttctgaccccacgtgcgattaacgaagaa
gtaggtaaacgcctgcttgaagagatggcctggtacgataactaccttgatatgggcaaa
acggatcgcagcgccaacccttctcctggcaacaagaaaggcggtctggcaaacgtggtg
gaaaaagcgctgggttctattgccaagtctggcaagagcgcgattgtcgaagtcttgtcg
ccgggtcaacgcccaaccaaacgcggcctgatttacgcggctacacccgccagtgatttt
gtctgcggtacgcagcaggtcgcttccgggatcaccgtgcaggtgttcaccaccggtcgc
ggtacgccgtacggactgatggccgtgccggtgataaaaatggcgacccgtaccgagctg
gccaaccgttggtttgacctgatggacatcaacgcaggcaccattgctaccggggaagaa
accattgaagacgtgggtctgaaactgttcgagtttattctcgacgtcgccagcgggcgt
aagaaaaccttctcggatcaatggggactgcataaccaactggcggtgtttaacccggcg
ccagtgacctga
DBGET
integrated database retrieval system
