Citrobacter sp. TSA-1: HF677_003040
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Entry
HF677_003040 CDS
T09275
Symbol
dhaR
Name
(GenBank) PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR
KO
K05880
transcriptional activator for dhaKLM operon
Organism
cib
Citrobacter sp. TSA-1
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cib03000
]
HF677_003040 (dhaR)
Transcription factors [BR:
cib03000
]
Prokaryotic type
Other transcription factors
Others
HF677_003040 (dhaR)
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Paralog
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GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS
HTH_8
GAF
AAA_2
PAS_4
AAA_5
AAA_16
PAS_8
HTH_50
AAA_7
Xre-like-HTH
AAA
HTH_17
PAS_7
Motif
Other DBs
NCBI-ProteinID:
QKE18698
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Position
634728..636653
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AA seq
641 aa
AA seq
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MTTHTQDIGKEVSSVIAQSWHRCSKFMQRETWQAPHQAQGLTFESICRRKTALLTIAQAA
LEDAWEFMDGRPCALLILDESACILSRCGDPQTVEQLAELGFRDGSYCAESIIGSCALSL
ATMPGQPTKTSGDQHFKQALHPWSFCSTPVFDNHGRLFGSISLCCLVEHECVSDLSLTLA
IAREVGNSLLTDSLLAESNRHLNQMYGLLESMDDGVMAWNEQGVLQFLNARAALLLHLDA
QASQGKNINDLLNLPMLLRRAIKHARGLNHVEVTFESQHQFVDAVITLKPIVEEQGNSFI
LLLHPVEQMRQLMTSQLGKVSHTFEQMSTDDPETRRLIHFGRQAARGSFPILLCGEEGVG
KELLSQAIHNESERASGPYIAVNCQLYANSVLGQDFMGSAPTDDENGRLSRLELANGGTL
FLEKIEYLAPELQSALLQVIKQGVLTRLDARRLIPVDVKVIATTTVDLANLVEQNRFSRQ
LYYALHSFEIVIPPLRARRNSIPSLIYTRLNSLKKRFSSSLKIDDDALAQLVAYSWPGND
FELNSIIENIAISSDNGHIRLSNLPDYLFAERPGLETASSLLPASLTFTAIEKEAIIHAA
RVTSGRVQEMSQLLNIGRTTLWRKMKQYDIDASQFKRKHLE
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgcacactcaggacattgggaaggaagtctcttcggtcattgcccagtcatgg
catcgttgcagcaagtttatgcagcgggaaacctggcaggcgccgcatcaggcgcagggc
ctgacctttgagtcgatctgtcgtcgcaaaacagcgctgctgacgattgctcaggccgcg
ctggaagatgcctgggagtttatggacggccgtccgtgcgcgctgttaattctggatgaa
tcggcctgtattctcagccgttgcggcgatccgcagacggtggagcaactggcggagctc
ggttttcgcgacggcagttactgtgcggaaagcattattggcagctgcgcgttgtcgctg
gcgacgatgccggggcaaccgacaaaaacctctggcgatcagcactttaaacaggcgttg
catccgtggtcgttctgctctacgccagtattcgataaccatggtcgactgtttggctcc
atctcgttgtgctgtctggtagagcatgagtgcgtttctgatttatccctgacgctggcg
attgccagagaagtcggcaactcattgctgactgacagcctgctggctgaatccaaccgc
catctgaaccagatgtacgggctgctggagagtatggatgatggcgtgatggcctggaac
gaacagggcgtattgcagttcctcaatgcgcgcgcagcgctgcttttgcatctcgacgcg
caggccagccaggggaagaatattaacgacctgctcaatctccccatgctgctgcgtcgg
gcgatcaaacatgcccgcggcctgaatcatgtcgaagtcacctttgaaagccagcaccag
tttgttgatgccgtcatcaccctgaaaccgattgttgaagagcagggcaacagctttatc
ctgctgctgcatccggtggagcaaatgcgtcagctgatgaccagccagctcggcaaggtg
agccacacctttgagcagatgtcgacagacgatccagaaacccgacgtttgatccacttt
ggtcgtcaggcggcgaggggaagtttcccgatcctgctgtgcggggaagagggcgtcggt
aaagagctactgagtcaggccattcacaatgaaagcgaacgcgccagcgggccgtatatc
gccgtgaactgccagctgtatgccaacagcgtactggggcaggattttatgggcagtgcg
cccaccgatgatgaaaacgggcggctaagccgtcttgaactggcgaacggcggcacgctg
tttctggaaaaaattgaatatctggcgccggagttacaatccgcgctgctgcaggtgatc
aagcagggcgttttaacccgcctggatgcccggcggctgattccggtggatgtcaaagtg
atcgctaccaccacggttgatctcgcgaatctggtggagcaaaaccgctttagccgtcag
ttgtattacgcgctgcactcttttgagatcgttatcccgccgctgcgggcgcggcgtaac
agtattccatcgctgatttatacgcggttgaatagcctgaaaaaacgcttttcatccagc
ctgaagatcgacgacgacgcgttggcacaactggtggcctattcgtggccgggtaatgat
tttgagctgaacagcattattgaaaacatcgctatcagcagtgataacggccatattcgg
ctgagcaatctgccggattatctgtttgccgaacgtcctggtctggaaacggcgtcttca
ctgctgcccgccagcctgacctttaccgccatcgagaaagaggcgattatccatgccgcc
cgcgtgaccagtgggcgtgttcaggagatgtcgcaactgctgaatattggtcgcaccacc
ctgtggcgtaagatgaagcagtacgacattgatgccagccagtttaagcgcaaacatctg
gagtag
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