Citrobacter sp. TSA-1: HF677_009550
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Entry
HF677_009550 CDS
T09275
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
cib
Citrobacter sp. TSA-1
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cib03400
]
HF677_009550
DNA repair and recombination proteins [BR:
cib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
HF677_009550
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
Hydrolase_like
Motif
Other DBs
NCBI-ProteinID:
QKE19903
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All DBs
Position
2013688..2014155
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AA seq
155 aa
AA seq
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MADVHDKATRSKNMRAIATRDTAIEKRLASVLVEQGVTFRVQDATLPGRPDFVVDDYRCV
IFTHGCFWHHHNCYLFKVPATRTAFWLEKIGKNVQRDARDCEKLQALGWRVLIVWECALR
GREKLGDDALSERVIEWICGGGDSAQIDTLGIHLL
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgttcacgataaagcgacgcgcagtaaaaatatgcgggcgatagcaacccgc
gatactgcaattgaaaaacgccttgccagcgtactggttgagcagggggtaacgtttcgc
gtgcaggatgcgacgttacccggtcgtcccgatttcgtggtggatgattatcgttgtgtg
atttttacccacggctgtttctggcatcatcacaactgctatctattcaaagtccccgcc
acacgaacagcgttctggctggaaaaaataggcaaaaatgttcagcgtgacgcgcgggat
tgtgaaaaattgcaggctttgggctggcgcgtactgattgtctgggagtgcgccctgcgt
gggcgcgaaaagctgggggatgacgcgttgtccgaacgcgtcatagagtggatctgcggc
ggtggcgacagtgcgcagatcgacaccctcggtattcatttactgtaa
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