Citrobacter sp. TSA-1: HF677_009725
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Entry
HF677_009725 CDS
T09275
Symbol
sdiA
Name
(GenBank) transcriptional regulator SdiA
KO
K07782
LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
Organism
cib
Citrobacter sp. TSA-1
Pathway
cib02020
Two-component system
cib02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HF677_009725 (sdiA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HF677_009725 (sdiA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cib03000
]
HF677_009725 (sdiA)
Transcription factors [BR:
cib03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
HF677_009725 (sdiA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
HTH_23
HTH_20
Sigma70_r4
CD4-extracel
Motif
Other DBs
NCBI-ProteinID:
QKE19936
LinkDB
All DBs
Position
2042078..2042800
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AA seq
240 aa
AA seq
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MQGHDFFTWRRSMLLRFQEMATAEDVYNELQQQTQHLEFDFYALCVRHPVPFTRPKTSLH
TTYPKAWVAHYQSENYFAIDPVLKPENFSQGHLPWNDTLFRDAQPLWDAARNHGLRKGMT
QCLMLPNRALGFLSVSRASVRNSRFANDEVELRMQLLVRESLSVLTRLQDDMVMAPEMRF
SKREKEILKWTAEGKTSSEIAIILSISENTVNFHQKNMQKKFNAPNKTQIACYAAATGLI
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgcagggtcatgatttcttcacctggcgacggagtatgctgttacgctttcaggaaatg
gcgacggcagaggatgtctataatgaattacaacaacagacgcagcatttagagttcgat
ttttacgcgctctgtgttcgtcatcccgtaccttttacccgacctaaaacgtcgcttcac
acgacctatcccaaagcatgggtggcgcattatcagtccgagaattatttcgctattgat
ccggtgctgaagcctgaaaacttcagtcaggggcatttaccctggaacgataccttattt
cgcgatgcacagcccctgtgggatgccgcgcgcaatcacggtttacgtaaagggatgacg
caatgcttaatgttgcctaatcgggcgttgggttttttatcggtatcgcgtgcgagtgtc
cgtaatagtcgctttgcaaacgatgaggtagagctcaggatgcaactgctggtgcgggaa
agcttgtcggtactgacgcggctgcaagatgacatggtcatggcgccagagatgcgcttt
agcaagcgggaaaaagagatattgaaatggacggcagaggggaaaacctcttcagagata
gcgataattctgtcgatttctgaaaataccgttaactttcaccagaaaaatatgcaaaag
aaatttaatgcacccaacaaaacgcagatcgcctgttatgctgcggcaaccgggctgatc
tga
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