Citrobacter sp. TSA-1: HF677_009740
Help
Entry
HF677_009740 CDS
T09275
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit UvrC
KO
K03703
excinuclease ABC subunit C
Organism
cib
Citrobacter sp. TSA-1
Pathway
cib03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HF677_009740 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cib03400
]
HF677_009740 (uvrC)
DNA repair and recombination proteins [BR:
cib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HF677_009740 (uvrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
HHH
GIY-YIG
UVR
HHH_5
HHH_3
HHH_2
UPF0758_N
Motif
Other DBs
NCBI-ProteinID:
QKE19939
LinkDB
All DBs
Position
2044203..2046035
Genome browser
AA seq
610 aa
AA seq
DB search
MTDQFDAKAFLKTVTSQPGVYRMYDDAGTVIYVGKAKDLKKRLSSYFRSNLASRKTEALV
AQIQQIDVTVTHTETEALLLEHNYIKLYQPRYNVLLRDDKSYPFIFLSGDTHPRLAMHRG
AKHAKGEYFGPFPNGYAVRETLALLQKIFPIRQCENSVYRNRSRPCLQYQIGRCLGPCVA
GLVSEEEYAQQVDYVRLFLSGKDDQVLTQLIARMEKASQNLEFEEAARIRDQIQAVRRVT
EKQFVSNTGDDLDVIGVAFDAGMACVHVLFIRQGKVLGSRSYFPKVPGGTELGEVVETFV
GQFYLQGSQMRTLPGEILLDFNLSDKTLLADSLSELAGRKINVQTKPRGDRARYLKLART
NAAVALTTKLSQQSTITQRLTALASVLKLPAVKRMECFDISHTMGEQTVASCVVFDANGP
LRAEYRRYNITGITPGDDYAAMNQVLRRRYGKAIEESKIPDVILIDGGKGQLGQAKAVFA
ELDVPWDKQHPLLLGVAKGADRKAGLETLFFEPEGEGFSLPPDSPALHVIQHIRDESHDH
AISGHRKKRAKVKSTSTLETIEGVGPKRRQMLLKYMGGLQGLRNASIEEIAKVPGISQAL
AEKIFYSLKH
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgatcagtttgatgccaaagcgttcctgaaaaccgtgaccagtcagcccggtgtt
tatcgtatgtatgatgacgccgggacggtcatctacgtcgggaaagcgaaagacctgaaa
aaaaggctttccagctacttccgtagcaaccttgcatcgcgtaagaccgaagcactggtc
gcgcaaatacagcagattgatgtcacggtaacgcacaccgaaaccgaggcgttattgctt
gagcacaactacatcaagctgtatcagccgcgttataacgttttgctgcgcgacgataaa
tcctatccttttattttcctcagcggcgatacccatcctcgcctggcaatgcatcgcggg
gccaagcatgccaaaggcgagtactttggaccgtttcctaacggctacgccgtacgcgaa
acgctggcgttgctgcagaaaatcttccctattcgtcagtgcgaaaatagtgtttatcgc
aatcgctcgcggccctgtctgcaatatcagattggccgctgcctcggtccgtgtgtggcg
ggcctggtgagtgaggaagagtatgcgcagcaggttgattacgttcgtctgttcctgtcc
gggaaagacgatcaggtattaacgcagctgatcgcccggatggaaaaggccagccaaaat
ctcgagtttgaagaggctgcccgcattcgtgaccaaattcaggccgtacgccgcgtgacc
gaaaaacagtttgtctctaataccggagacgatctggacgtcatcggcgtggcgtttgac
gccggcatggcctgtgtgcacgtgctgtttattcgccagggtaaagtgttaggcagtcgt
agctatttcccgaaagtccctggtggaacagaactcggcgaggtcgttgaaacctttgtc
ggacagttttatctgcagggaagtcagatgcgcaccttacccggtgagatcctgctcgat
tttaatcttagcgataaaaccctgctggcagactctctgtctgagctggccgggcggaag
atcaacgttcagacgaaaccgcgaggcgatcgcgcgcggtatctgaagctggcgcgtacc
aacgcggcggtggcgttaaccacaaaactttcccagcagtcgaccattactcaacgcctg
acggcgctggcatcagtactcaagttacccgcagtgaaacgcatggagtgctttgatatc
agccacacgatgggcgagcagacggtagcctcctgcgtggtattcgatgccaatggacca
ctgcgcgccgagtatcgccgctataacatcacgggtattacgccgggtgatgattatgcg
gcaatgaatcaggttctccgtcggcgctacggtaaggcgattgaagaaagtaagattccg
gacgtcatattgatcgacggcgggaaaggtcaactggggcaggcgaaagccgtgtttgct
gagctggacgtgccctgggacaaacagcacccgcttttgttgggtgtggcaaaaggggcc
gatcgtaaagcaggcctggaaacgctgttctttgagccggaaggtgagggctttagccta
ccgccggattcgcctgcattgcacgttatccagcatatccgcgatgaatctcacgatcat
gcaattagcgggcaccgtaaaaaacgggcgaaggtgaaaagtaccagcacgctggagact
attgaaggtgtcgggccgaagcgtcggcagatgttgttgaaatatatgggcggtttgcaa
ggtcttcgtaacgcgagtattgaagaaattgcaaaagtgccgggtatttcgcaagctctg
gcagaaaagatcttctactcgttgaaacattag
DBGET
integrated database retrieval system
