Citrus x clementina (clementine): CICLE_v10000405mg
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Entry
CICLE_v10000405mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cic
Citrus x clementina (clementine)
Pathway
cic03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
CICLE_v10000405mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cic03021
]
CICLE_v10000405mg
03036 Chromosome and associated proteins [BR:
cic03036
]
CICLE_v10000405mg
Transcription machinery [BR:
cic03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
CICLE_v10000405mg
Chromosome and associated proteins [BR:
cic03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
CICLE_v10000405mg
PBAF complex
CICLE_v10000405mg
GBAF(ncBAF) complex
CICLE_v10000405mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
CLP1_P
Motif
Other DBs
NCBI-GeneID:
18040408
NCBI-ProteinID:
XP_006434249
UniProt:
V4V639
LinkDB
All DBs
Position
Unknown
AA seq
576 aa
AA seq
DB search
MPASPSFHSDTRKWKRRKREPRKQLNKLDEDDVVEDEDEEQDNNETDNHNNNSNADHRDN
GDDFQHATAPDPASNETEVLIDGGTRICEFPTAVQRVVNRPHVSVMDIVAIEAAYLAGDA
SGRSSAVALENISYGQLQALSAVPADSAVLDPERSDTSCVITPPQIMEGKGVVKRFGSRV
HVLPMHSDWFSPDTVHRLERQVVPHFFSGKSPDHTPEKYMECRNHIVAKYMDNPEKRLIV
SDCQGLVDGVSPEDLTRIFRFLNHWGIINYCAAVQSPEPWNRGSYLREDSNGEVSVPSDA
LKSIDSLIKFDKPKCSLKVADVYSSSCGGADFFDLDNTIRERLSENHCNYCSQPIPAVYY
QSQKEVDVLLCPECFHEGRFVTGHSSLDYIRVDPAREYGDIDGETWSDQETFLLLEGIEM
YNDNWNEIAEHVGTKSKAQCILHFVRLPMEDGILENVEVPNTSRTSNSSSRDDRGGLHST
VNGDLPGAGLQEADMENRLPFSNSGNPVMALVAFLASAVGPRVAAACAHASLAALSKQME
GAGHGNRLVYFLLIFVVNDKNGYLHLCYIQCVRMIS
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgccagcctccccttccttccattcagatactcgaaaatggaagaggcggaagcgggag
ccacgaaagcaactcaacaagctcgacgaagacgacgtcgtagaggacgaagacgaggaa
caagacaacaacgaaacggataaccacaataacaattctaacgcggaccaccgcgacaac
ggagacgatttccagcacgcaacggctccggatccggcctcaaacgagaccgaggtcttg
atcgacggtgggacccgcatatgcgagtttcctaccgcggttcagcgcgtggtgaaccgg
ccgcacgtctcggtgatggatattgtggccattgaggcggcatatttggccggggacgcc
agtgggaggagttcggcggtggcgttggagaatatttcgtatgggcagctgcaggcgttg
tccgctgtgccggccgatagtgcggtgttggatcctgagaggagcgatacatcgtgtgtg
attactccgccacaaattatggaaggaaaaggtgttgttaagcggtttggaagtagagtt
catgtacttcctatgcattcagattggttttccccagacacagtgcatcgacttgaaaga
caagtggtaccacatttcttctctgggaaatctccagatcatacaccagagaagtacatg
gaatgtagaaaccatattgtggccaaatatatggataatccagagaaaaggcttatcgtt
tctgattgtcagggtttggtggatggtgttagccctgaagatctaactcgaatttttcga
ttcctgaaccactgggggattatcaattattgtgctgctgtacaaagtcctgagccttgg
aatcgtgggtcctacttgagagaggattcaaatggtgaggttagtgttccatcggatgcc
ttaaagtccattgacagtttgattaaatttgacaagcctaaatgtagcctcaaggtggct
gatgtgtattcatcatcttgtggtggtgctgatttctttgacttggacaacaccatccga
gagcgtttatctgaaaaccattgcaattattgttctcagccgattcctgctgtgtactat
cagtcacaaaaggaggttgatgtacttctatgtcctgaatgcttccatgaaggaagattt
gttactggtcattcaagcctagattatattagggttgatccagcaagagaatatggtgat
attgatggagagacttggagtgatcaagaaacatttttgctgcttgagggtatagaaatg
tataatgataattggaatgaaattgcagagcatgttggtaccaagtcaaaagcacaatgt
atcctccatttcgtccgtctacccatggaggatggcatactggaaaatgtcgaagttccc
aacacttccaggacatctaattcatcaagtagagatgatcgtggaggattgcattcaact
gtaaatggcgatctgccaggagcaggccttcaagaagctgatatggaaaaccgcctccca
ttttcaaattctgggaatccagttatggccttggttgcctttttagcttctgctgtcgga
ccaagagtcgctgcagcttgtgcccatgcatccttggcagcattgtctaaacaaatggaa
ggtgctggacatggtaataggttagtctatttccttctcatttttgtcgttaatgacaaa
aatggatatctccatttgtgctacatccagtgtgtcagaatgatttcttag
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