Citrus x clementina (clementine): CICLE_v10019553mg
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Entry
CICLE_v10019553mg CDS
T02982
Name
(RefSeq) hypothetical protein
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
cic
Citrus x clementina (clementine)
Pathway
cic04120
Ubiquitin mediated proteolysis
cic04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
CICLE_v10019553mg
04120 Ubiquitin mediated proteolysis
CICLE_v10019553mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cic04121
]
CICLE_v10019553mg
Enzymes [BR:
cic01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
CICLE_v10019553mg
Ubiquitin system [BR:
cic04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
CICLE_v10019553mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
FlxA
zf-ANAPC11
zf-RING_16
zf-RING_11
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
18049748
NCBI-ProteinID:
XP_006443186
UniProt:
V4U2P5
LinkDB
All DBs
Position
Unknown
AA seq
555 aa
AA seq
DB search
MMRLQTYAGFSFMATLAVVYHAFNSRRQFYPSMVYLSTSKISLVLLMNMGLVIMCILWQL
IKKVFLGSLREAEVERLNEQSRREIMEILFAITIFRQDFSVSFLAMVTTLLLIKALHWLA
QKRVEYIETTPTVPLLSHIRIVSFMSFLLLVDSLFLYSSVKFLLQTRQASVSLFFSFEYM
ILATTTVSIFVKYVFYVSDMLMEGQWERKAVYTFYLELIRDLLHLSMYLCFFLVIFMNYG
VPLHLIRELYETFRNFRIRVADYVRYRKITSNMNDRFPDASPEELDASDSTCIICREEMT
TAKKLICGHLFHVHCLRSWLERQHTCPTCRALVVPPENGASTAGVQHGQRPDTHQSGTAT
ANTASQGSANDAANNNLTLHQARLQAAAVAASVYGKSYVYPSPNTLVWSPGYVVLPHANR
PLGDYTSVELGQEQASAGQPQQFVNPGGSATFSFPQFPQSVFVPFQTPDANLIGGERLPS
TQNTPVSQLEAQRKFIENQIEVLQNQLQLLQKSKPEGNVEINSTASSGGKGKAVASSSVS
ASDSGCHGENQEISS
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggctgcaaacgtacgcggggttcagtttcatggctactttagctgttgtgtac
catgcatttaacagcagaagacaattttacccttccatggtgtatttatcaacttctaag
atcagtttggtgctgcttatgaacatgggtttggtcattatgtgcattttgtggcaattg
atcaagaaggtgtttcttggttctctccgtgaagccgaggttgagaggttgaatgagcag
tcaaggagagagatcatggaaatactctttgctatcacgattttccggcaggacttctct
gtttcgtttcttgctatggtcactacgcttttgctgattaaggctttgcactggttggct
cagaagagggtggagtacattgagactaccccaactgttcccttgttgtctcacatccgg
attgtttcttttatgagctttcttcttcttgtggattctttatttttgtacagttctgtc
aagtttctgctacagacacggcaagcttcagtttctcttttcttttcgtttgagtacatg
atactggcgacaacaacagtatcaatatttgtaaaatatgttttctacgtgagtgatatg
cttatggaaggacaatgggaaagaaaggctgtttacaccttctacttggaactcatccga
gacttgcttcatttgtctatgtacctgtgcttctttcttgtgattttcatgaactatggt
gttcctttgcacttaatacgtgagctatatgagacatttaggaatttcaggatccgtgtt
gctgattatgttcgttatcgaaagatcacttcaaatatgaatgatcgatttccagatgca
tcacctgaagagcttgatgcaagtgattcaacctgtattatatgtcgtgaggagatgaca
acagccaagaaattaatttgtggacatcttttccatgtccactgccttcgctcatggttg
gagcgacagcatacctgtcctacctgcagagctttagttgtaccacctgaaaatggggca
agcactgctggagtacaacacggccaaaggccggatactcaccaatcgggtactgctact
gcaaacacagcttcccaaggttcagctaatgatgcggctaacaataacttgactctccac
caggctaggctccaggctgccgctgtcgctgcctcggtatatgggaaatcctatgtttat
ccttctcccaacacactagtttggtctcctggatatgttgtacttcctcatgctaacagg
cctttgggtgattacaccagtgtagaattgggtcaagaacaggcttctgctggtcaacca
cagcagtttgtgaaccctggtggatctgctaccttctcgtttcctcaatttcctcaatca
gtttttgtcccttttcagacacctgacgccaatttgattggtggagaaagactgccaagc
actcaaaatacaccagtctctcagctggaagctcagagaaaatttattgagaaccagatt
gaggtcctgcaaaaccagctccaacttctgcagaagtcaaagcccgagggaaatgtggaa
attaattctacagcgtcatcaggtggcaaaggaaaggcagttgcatcttcatctgtttct
gcatcagactctggttgccatggggaaaaccaagaaattagttcatag
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integrated database retrieval system