Ctenopharyngodon idella (grass carp): 127495614
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Entry
127495614 CDS
T08802
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cide03016
]
127495614
Enzymes [BR:
cide01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
127495614
Transfer RNA biogenesis [BR:
cide03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
127495614
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
HEM4
Flavodoxin_5
Motif
Other DBs
NCBI-GeneID:
127495614
NCBI-ProteinID:
XP_051718513
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Position
15:24368411..24438694
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AA seq
750 aa
AA seq
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MLFLAVFSGLVYSTAGSEMSGVLSDVWDYTESYLLSVWQNRLYVYTAAAVLIGIWFTVNM
LFKKKKVVNPVSQWLYKSAEKQELSPETEKVIHVSGVKVFYGSQTGTAKGFAKELAEDVS
TQGIQCEVLDMKEYDPDDRLAEECTSKMICVFLVATYTDGQPTESAEWFCKWLEEASTDF
RYGKTYLKGMRYAVFGLGNSVYVGHYNTVSKNIDKWLWMLSAARIMTRGEGDCNVVKSRH
GSVQADFQAWKTKFLNRLQALAKGEKKACSGKCKNGSCKNKKKHKEEAEDSHSLAEKNNS
EEELMESSSDAESSAEEEKSHGSVIDMEDLGNVMNRMKKAKRMEGDEDESQRVKLSKQNG
VRKSESEEERREMITPALRDALTKQGYKLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGI
ESHRCMETTPSLACANKCVFCWRHHTNPVGTEWRWKMDPAEKIIQEAVENHRNMIRQFRG
VPGVRPERFEEGLTVKHCALSLVGEPIMYPEINSFLRLLHQQSISSFLVTNAQFPEEIRN
LVPVTQLYVSVDASTKDSLKKIDRPLFKDFWQRFLDSLRALGEKQQRTVYRLTLVKAWNV
DELKAYSDLIALGQPDFIEVKGVTYCGESTASSLTMANVPWHEEVVYFVQQLANLLPDYE
IACEHEHSNCLLLAHHKFKVDGEWWTWIDYERFQELIQEYEESGGTKSFSAMDYMAKTPS
WAIFGARERGFDPSDTRFQRKNKTKDISGC
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttttagcggtgttttcgggtttggtgtattctacagctggctctgagatgtca
ggtgttttgagtgatgtttgggattacactgagagttacctgctgtcagtgtggcagaac
aggttatatgtgtacactgctgctgctgttctcataggaatctggtttactgtcaacatg
cttttcaaaaagaaaaaagtggtcaaccctgtaagtcaatggctgtataaatctgcagaa
aagcaggaactttcacctgaaacagaaaaagtcattcatgtttctggggtcaaagtcttc
tatggatcacagacaggaacagcaaaggggtttgcaaaagagcttgctgaagatgtcagc
actcaggggatccagtgtgaggttctagatatgaaagagtatgacccagatgacagactg
gctgaggagtgtacaagcaagatgatctgtgtgttcctggtggccacatacactgacgga
cagcccactgagagcgccgaatggttctgtaaatggcttgaggaagcatccactgacttc
cgatatgggaaaacatacctgaagggaatgagatatgccgtctttgggctggggaactcc
gtttatgtcggccattacaacaccgtcagtaagaacatagataagtggttgtggatgctg
agtgccgcacggatcatgaccagaggagaaggcgactgcaacgtggtgaagagccgacac
ggcagcgtgcaggccgactttcaggcctggaaaacgaagttcctaaaccggctgcaggcc
ctggccaaaggggagaagaaagcctgctctggcaagtgcaagaacggcagctgcaagaac
aagaagaaacataaggaggaggcagaggacagtcactcgcttgctgagaagaacaactct
gaggaggagctaatggagtccagcagtgatgcggagtcctctgctgaggaagagaagtct
catggctccgtcattgacatggaggaccttgggaatgtgatgaatcgtatgaagaaagcc
aagaggatggagggagatgaagatgagtcccagagggtgaagctgtcaaagcagaatgga
gtgaggaagagcgagtcagaggaggagcggagagagatgatcactcctgccttgagagat
gctctgactaaacaagggtataaactaataggaagtcactcgggggtaaaactgtgtcgt
tggactaagtcaatgctgagagggagaggaggctgctataaacacaccttctacgggatt
gaatcgcatcgatgtatggagaccacgccgagtctggcctgtgccaacaaatgtgttttc
tgctggagacaccataccaacccggtgggtacagagtggcgctggaaaatggacccggcc
gagaagatcattcaggaggccgtggagaaccacaggaacatgattcggcaattcagagga
gttccaggtgtgcgtcccgagcgttttgaagagggccttacagtgaagcactgtgctctg
tctctggtgggcgaacccatcatgtatcctgagatcaactcctttctccgactgcttcac
caacagagcatatccagcttcttagtcaccaatgcccagttccctgaggagatcaggaat
cttgtacctgttacacaactttatgtcagcgttgatgccagcactaaggacagtctgaag
aaaattgaccgtcccctcttcaaagacttctggcagcgctttttggacagtctcagagca
cttggtgaaaagcaacagcgtacggtgtacagactgaccctggtgaaggcctggaatgtg
gatgagctgaaggcctactcagatctcatcgcccttggccagccagatttcatcgaggtc
aagggagtgacgtactgtggcgagagcacagccagtagcctgacaatggctaacgtaccc
tggcacgaggaggtcgtctacttcgtgcagcagctggccaacctgctcccagattatgaa
attgcctgcgaacatgagcactccaattgtctgttacttgcacaccacaagttcaaagtc
gatggggaatggtggacatggattgactatgagcgcttccaggagctcattcaagaatat
gaggagagcgggggcaccaagagcttctctgcaatggactatatggccaaaacccctagc
tgggccatatttggggccagagagaggggatttgatccctcggacacacgcttccagaga
aagaataagaccaaagatatctcagggtgttga
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