Ctenopharyngodon idella (grass carp): 127505851
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Entry
127505851 CDS
T08802
Name
(RefSeq) double-stranded RNA-specific editase B2
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cide03041
]
127505851
Spliceosome [BR:
cide03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
127505851
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Motif
Other DBs
NCBI-GeneID:
127505851
NCBI-ProteinID:
XP_051737703
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All DBs
Position
23:3175843..3385597
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AA seq
740 aa
AA seq
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MASVPSSQVKCKFKRRRRRRSKRKEKMNMLSALIAPFKYISPAANGTEDEDTLSTSSAEV
KENRNTGNLEDCAIVPSDCQTLFLSDSPRDGAPGLKRKRPLEEDNNGHLRKLRLYCKKLA
WSDAPKNALVQLNELRPGLQYRMVSQTGPVHAPVFSIAVEVNGLTFEGTGPTKKKAKMKA
AEMALKSFIQFPNASQAHLAMGGLSNPAADFTSDQADFPDTLFKGFEADGCRSAESELLS
SALRLRHTLDLMVVQARQGDPCLPPPPVPMPQPSPVVLLNDLRPGLRYACLSERAQGKRA
HRSFVMAVRVDGRIFEGSGRSKKQAKRQAALCALQALFNFRLAPEARAGHRPSRIKCPHL
PQEFADAIFHLVREKYTELAGCSSLLHARHKGLAGIVMTRGVDLRQAQVVALSTGTKCIN
GEYISDQGLVVNDCHAEITTRRALLRFLYSQLELHLSKRKEDWEQSIFVRHKDSCLRLRE
NVLFHMYISTSPCGDARVNSPYEITSDLQSNRHLVKKFHSHLRTKIESGEGTLPVKSAGP
VQTWDGVLQGERLITMSCTDKICRWNVLGLQGALLSHFVEPVYLYSLTVGSLRHTGHFSR
MMNHRLERVGPLPTCYRRNQPLLSGMSNSDCRQQGKSVCYSVNWTAGDAQLEVLNASTGK
RRDSGTPSRLCKHALFARWIRLYRKLVVRGASGMPLYCEAKQAAGTYQTVKLQWLKGLQE
AGLGTWVRKPPEQENFTLTV
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcatcggtcccgagcagccaagtcaaatgcaagttcaagaggaggaggaggagaagg
tccaagcgaaaagagaaaatgaacatgttgtctgcactgattgcccccttcaagtacatc
agcccagcggccaatggcacagaagatgaggacacattgagcaccagcagtgctgaggtc
aaggagaaccgtaacacaggaaacctggaggattgtgccattgttccgtcagactgccaa
acactcttcctgtccgattcgcccagggacggggcacccggcctcaagcgaaagcggcct
ttggaggaggacaacaacggacacttgcgcaaattgcgtctgtactgcaagaaactggca
tggtccgatgcaccaaagaatgccctggtccagttgaacgagctaagaccaggtctacag
taccggatggtctctcagacaggaccggtgcatgcgccggtcttttccattgccgtagaa
gtcaacggactcacattcgagggcaccggccctacgaagaagaaggctaagatgaaggct
gccgaaatggccctaaagtcattcatccagtttcccaacgcctctcaagctcatttggcc
atgggcggcctgagcaaccctgccgccgacttcacctcggaccaggccgatttccctgac
acgctgttcaaaggtttcgaggctgacggctgccgctctgccgagagtgagttgctgtct
agcgcgcttcgtttgcgccacacgttggacttgatggttgtacaggccaggcaaggagat
ccctgccttcccccacctccagttcccatgccccaacccagtcccgtcgtcctgctcaat
gacctgcggcccggcctgcgatacgcctgcctgtcggagcgtgcccagggcaaacgggca
caccgcagcttcgtcatggccgttcgagtggacggcaggatattcgagggctcgggtcgc
agtaagaagcaggcgaagaggcaggcggctctgtgcgccctgcaggcgctcttcaacttc
aggctggctcctgaggcgagagcgggacaccggcccagtaggatcaaatgccctcatttg
ccccaggagtttgcagatgcaatattccacctggtgcgagagaaatacacagagctggcc
ggctgctcctcactgctacacgcgcgtcacaaaggcctggcgggcatcgtcatgaccaga
ggtgtggatctgagacaggcccaagtggtggcgttatcaaccggcactaaatgcattaac
ggagaatatatcagtgaccagggcctggtggtcaacgactgccatgctgaaatcacgact
agacgagccctgctgcggttcctgtactcccaactagagttacacctcagcaaaaggaaa
gaggactgggaacagtcgatcttcgtacggcacaaagactcctgtttgagactgagagaa
aatgtcctcttccacatgtacatcagcacctcaccctgcggggacgcccgtgtgaactcg
ccgtatgaaatcacctcggacttgcaaagcaacagacacttggtgaagaagtttcacagc
caccttcggacgaagattgaatcaggggaggggacactgcccgtgaagtccgcagggccc
gttcagacgtgggacggtgtccttcaaggagaacgtctcatcaccatgtcatgcactgac
aagatttgcaggtggaatgtgctcggcctgcagggggcgctgctcagtcattttgtggag
ccggtatatctgtacagcctgacggtgggcagcctgagacacacgggtcacttctctagg
atgatgaaccacaggctggagagagtcggccctctgcccacctgctaccgccgtaaccag
cctttactcagcggcatgagcaacagtgactgcaggcagcaggggaagtctgtgtgttac
agtgtcaattggacggcaggcgacgcccagctggaagtgctcaacgcgtctactggaaag
aggagggactccggaactccgtccagactttgcaagcatgcgctttttgcacgttggatc
agactctatcgcaagctggtggtccgtggggcgagtggtatgccgttgtactgtgaagcg
aagcaggcggccggcacctaccagactgtgaagctgcagtggttgaagggtctacaggaa
gcaggattagggacctgggtcagaaaacctcccgagcaggaaaacttcactctgactgta
tga
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