Ctenopharyngodon idella (grass carp): 127520790
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Entry
127520790 CDS
T08802
Name
(RefSeq) DNA-directed RNA polymerase, mitochondrial isoform X1
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
cide03029
]
127520790
Enzymes [BR:
cide01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
127520790
Mitochondrial biogenesis [BR:
cide03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
127520790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
PPR_2
PPR_3
Snx8_BAR_dom
Motif
Other DBs
NCBI-GeneID:
127520790
NCBI-ProteinID:
XP_051765316
LinkDB
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Position
10:11702838..11756260
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AA seq
1331 aa
AA seq
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MSLLRLCAYSAGLTRSFAVDRGIRFLNGDYCRLCLRIRSNGERQIQDKTWATVYQRHYSA
IPKKEDGKKRFWEQSQLLDVLKARIQQLQSDVVVDVKHSKVQIIKMQQRLKKIAPGNSQK
NLPGEKAEMLKSGPAKAAKKGVTEGVTPFKTHASRWMEKLKREKWIKPKNQTSHKMHDKP
VAGKSSKGSSMIPATSTKTITTAKRSKTKTKVEATASTTTSSKGKENTLQKKSKWKVLRA
SESLAVRFPGVQKVSSSEVGLVSGMSIEEKLAVVTDNELVKDEELDVDQQSLTAPEKLLE
DKEGNRYGDPELRIRCYLEACVFIDDVSRAQNCLLSHHRQLSKRTQLSISAYNVIMRMWA
KKGSINHIRRLFVLIEEAGLKPNVTSYCAALECMGRMSACEKWIITRCLQQMEVDGMSVD
DVFSQCVFKKDEREMVLRAVRLVKPEYQPLVSKDQPVCSLPLVEQFYAEREGATYPKLDF
SLKELRDRFSLQLAMEKATTITIDSVEALKPVTDHMAKMRELLSTQKKHWEKALLQALKE
KKRILSNNSQRSWSTCIYPYLCILDDQDYVNIMLQSLDKLSPSGESLLFMAEEMGNRVHN
LYCIRQKSHSQMIEKLGSIYSSYAELLANDTKTNGMLPRECWASLEMEKCSGPSLLSDDT
PWPLVLMVQLGSFLVDLMVHELKVRSNILNTAQEKKLIPVLYHMYTFRSNHKIGFIKPHP
IVTQIQRVAMETKLTFDSYVMPMLCPPVPWTSPKSSAYLLTPTKLMRATDGAIQHQLLLE
KSRDEDLHAVLDSLNQVGNCPWRINKPLLDIIISIFNDKGSDKLCVPPPLSEAPEIPRFN
PHDPSYTQIEKAYMKWEGVKAKKKVAEMHSLRMDALYKLSIANHMRDEIFWFPHNMDFRG
RTYPRPPYFNHLGSDVTRALLVFAEGRPLGPKGLDWLKIHLVNLTGLKKRSSLAGRLEYA
ESIMEDILDSADHPLDGRKWWMNADEPWQALGCCMEIANASRSPDHTKFISYYPVHQDGS
CNGLQHYAALGRDVIGATSVNLMPCELPQDVYSGVAQQVEEFRARDAEKGLKIAQVLEGF
ISRKVVKQTVMTVVYGVTRYGGRLQIEKRLKEIDDFPKDYIWDASHYLVVQVFNSLKEMF
TGTREIQEWLTESARLIAKSGRTVEWVTPLGLPIVQPYHRIKNQTLKSSIQNLCINISHD
ANEKPDSMKQKNAFPPNFIHSLDSTHMMLTSLHCYRAGLTFVSVHDCYWTHALTVDTMNR
VCREQFVALHSQPILEELSGFLLQKYCSRPPVVSKPKKIQEYYKMVQLLSSVPQTGDFDL
EKVKESVYFFS
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttttgagactgtgtgcctattcagcgggtttaactcgtagttttgctgttgac
aggggtataagatttctaaatggcgattattgccgcctgtgtcttagaatacggagtaat
ggagaaagacaaatacaagacaaaacatgggctacagtttaccaaagacactattcagcc
atccccaagaaggaagatgggaagaaaagattctgggaacagtctcagctgttggatgtt
ctgaaagccagaatccaacagctgcaatctgacgttgttgtagatgtcaaacattcaaag
gtgcaaatcatcaaaatgcagcagagactaaagaaaatagcacctgggaatagtcaaaag
aacttgccaggagaaaaagcagagatgcttaaaagtgggcctgctaaagctgctaaaaaa
ggtgtaactgaaggtgtcacgccttttaaaactcacgcaagtcgctggatggagaaactc
aagcgtgaaaagtggattaaacccaaaaaccaaacttcacataaaatgcatgacaagcca
gttgcaggtaaaagcagcaaagggagttcaatgattcctgctacatctacaaagaccatc
acaacggctaagaggagtaagacgaaaactaaagtagaagccactgcgtctaccacaaca
tcctccaaaggcaaagaaaacactttgcaaaaaaagtctaaatggaaggttttgagagcc
tcagaaagtttagctgtcaggtttccaggagtgcaaaaggtctccagcagtgaagttggc
ttggtttctgggatgtctattgaagagaaactagcagtggttacagataatgagttggtt
aaggacgaggagctcgatgtagaccagcaaagcttgactgctcctgaaaagcttctggag
gataaggaaggaaaccgttatggagatcctgagctcagaattcgctgttacttggaggca
tgtgtgttcattgatgatgtatctcgagctcagaactgtctactatctcatcaccgtcag
ttatccaaacgcacgcaactgtctatcagcgcctacaacgtcataatgaggatgtgggcc
aaaaaaggttccatcaatcacattcgtcgcttgtttgttctgattgaagaagcaggtctg
aaacccaatgtcacttcttactgtgctgctctggagtgcatgggccgcatgtctgcgtgt
gaaaaatggatcattaccaggtgtctgcagcagatggaggtggacggcatgtctgtggat
gatgtgttcagccagtgcgtgtttaagaaggatgagagagaaatggtcctgagggccgtc
cgattagtgaaaccagaataccaacctcttgtatccaaagatcagcctgtctgttccttg
ccattggtggaacaattttatgctgagagggaaggagctacgtatcctaaactggacttc
agtctgaaggaactgcgggaccggttcagtcttcagctggcaatggagaaggccactacc
atcactattgactccgtagaggccttaaagcctgtcaccgatcacatggccaaaatgaga
gaattactatcaacacaaaagaaacactgggagaaagctcttctccaggcactgaaggaa
aagaaacggatattatccaacaacagccagagatcctggagtacctgcatatacccatac
ctgtgtatcctggatgatcaggattatgtgaatatcatgcttcagagtttagacaaactg
tcgcccagcggtgaatctttgctcttcatggctgaggagatgggaaacagagtccacaat
ctgtactgcatccggcagaagagccacagtcagatgattgagaagcttgggagtatctac
agctcatatgctgaactcctggcgaacgacaccaagaccaatggcatgctgccgcgggag
tgttgggcgagtcttgagatggagaagtgcagcggcccctctcttttaagtgacgacacc
ccttggccgctggtcctgatggtgcagctgggcagcttcctggttgacctgatggttcat
gagctcaaagttcgaagcaacatcctcaataccgctcaagagaagaagctcattcccgtt
ctataccacatgtacacattccgcagcaatcataagatcggcttcatcaaaccacatcct
attgtgacacaaatccagagggttgcgatggaaaccaaacttacatttgattcctacgtc
atgcccatgttgtgtccgcccgtgccctggacgtccccaaagagcagcgcgtacctgctg
acgcccactaagttgatgcgcgccaccgacggagccatccaacaccaacttctcctggag
aagagccgggatgaagatctccatgctgtgctggactccctcaatcaggtgggcaactgt
ccctggaggatcaacaaacccctgttggacatcatcatctcgatattcaacgacaaaggc
agcgacaagctctgcgtccctccaccgctgtcagaagcgcctgagattcctcgctttaat
cctcatgacccgtcctacactcagattgagaaggcctacatgaagtgggagggagtcaaa
gccaagaagaaggtggcggagatgcacagtctccgaatggacgcactgtataagctgtcc
atcgccaaccacatgagggatgagatcttttggtttccccataatatggacttccgaggt
cgtacgtacccccgtccgccttattttaaccaccttggcagtgacgtgaccagggcctta
ctggtgtttgcagagggacgacctctcggtcccaagggcctcgactggttgaagatccac
ctggtgaacctcacggggttgaagaagcgtagctcactagctggaagattggagtatgct
gagagcatcatggaggacatcctagactcggcagaccatcctcttgacggtcgtaaatgg
tggatgaatgcagatgagccgtggcaggcactgggttgctgtatggagatagcaaatgct
tcgcgctcacccgaccacaccaaattcatctcctattaccctgtacatcaggacggctct
tgcaacggcctccagcactatgctgccctcgggcgggatgtgattggtgctacttcggtg
aacctcatgccctgtgaactgcctcaggatgtctacagtggtgtagctcagcaggtggaa
gagttcagggctcgggatgcagagaagggtttgaagatcgcacaggtgctggagggcttc
atcagcaggaaggtggtgaagcagacagtgatgactgtggtctatggcgtcactcgctac
gggggtcgtctgcaaatcgaaaagcgactaaaagaaatcgatgatttccctaaggattac
atatgggatgcttcacattacctggtggttcaggttttcaacagcttgaaggaaatgttt
actgggacgagagagattcaggaatggctgacggagagcgctaggctaatagctaagtct
gggagaacagtggagtgggtgacaccgctgggacttcctattgttcagccctaccacaga
attaagaaccaaacgctcaagagcagcatacagaatctgtgcatcaatataagccatgat
gccaatgagaaaccagacagcatgaagcagaaaaacgccttccctcctaatttcatccac
tctctggactccacgcacatgatgctgacatcactgcattgttacagggccggtctcaca
tttgtgtctgtccatgactgttattggacccatgctctgacggtggacaccatgaacagg
gtgtgtcgtgagcagtttgtggctctgcatagtcagcccattctagaggagctgtccggg
tttcttctacagaaatattgcagcaggcctccggttgtatccaagccaaagaagattcaa
gaatactataagatggtgcagcttttgtccagcgttcctcaaacaggtgatttcgacctg
gaaaaggtgaaagaatcagtgtatttcttcagctga
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