Citrobacter sp. FDAARGOS_156: AL515_20265
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Entry
AL515_20265 CDS
T04313
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K05880
transcriptional activator for dhaKLM operon
Organism
cif
Citrobacter sp. FDAARGOS_156
Brite
KEGG Orthology (KO) [BR:
cif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cif03000
]
AL515_20265
Transcription factors [BR:
cif03000
]
Prokaryotic type
Other transcription factors
Others
AL515_20265
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS
HTH_8
GAF
AAA_2
PAS_4
AAA_5
AAA_16
PAS_8
HTH_50
Xre-like-HTH
AAA_7
AAA
HTH_17
PAS_7
Motif
Other DBs
NCBI-ProteinID:
AMH16557
UniProt:
A0A9Q2KLE1
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Position
complement(4326910..4328835)
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AA seq
641 aa
AA seq
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MTAHTHGIGKEVSSVIAQSWHRCSKFMQRETWQAPHQAQGLTFASICRRKTALLTIGQAA
LEDAWEFMDGRPCALLILDESACILSRCGDPQTVEQLAELGFRDGSYCAESIIGSCALSL
ATMPGQPTKTSGDQHFKQALHPWSFCSTPVFDNHGRLFGSISLCCLVEHECVSDLSLTLA
IAREVGNSLLTDSLLAESNRHLNQMYGLLESMDDGVMAWNEQGVLQFLNARAALLLHLDA
QASQGKNINDLLNLPMLLRRAIKHARGLNHVEVTFESQHQFVDAVITLKPIVEEQGNSFI
LLLHPVEQMRQLMTSQLGKVSHTFEQMSTDDPETRRLIHFGRQAARGSFPILLCGEEGVG
KELLSQAIHNESERASGPYIAVNCQLYANSVLGQDFMGSAPTDDENGRLSRLELANGGTL
FLEKIEYLAPELQSALLQVIKQGVLTRLDARRLIPVDVKVIATTTVDLANLVEQNRFSRQ
LYYALHSFEIVIPPLRARRNSIPALIHTRLNSLKKRFSSSLKLDDDALAQLVAYSWPGND
FELNSIIENIAISSDNGHIRLSNLPDYLFAERPGLEAASSLLPASLTFTAIEKEAIIHAA
RVTSGRVQEMSQLLNIGRTTLWRKMKQYDIDASQFKRKHLE
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgcacactcatggcatcgggaaggaagtctcttcggtcattgctcagtcatgg
catcgttgcagcaagtttatgcagcgggaaacctggcaggcaccgcatcaggcacaggga
ctgacttttgcgtcgatttgtcgccgtaagactgcgctactgacgattggacaggctgcg
ctggaagatgcctgggagtttatggatggacgtccgtgcgcactgctgattctggatgaa
tcggcttgtattctcagccggtgcggcgatccgcagacggtggaacagctggcggaactt
ggctttcgtgacggtagctactgtgcggaaagcattatcggcagttgtgcgctatcgctg
gcaacgatgccagggcagccgacaaaaacctctggcgatcagcattttaagcaggcgctg
catccgtggtcgttctgctcgacgccggtattcgataaccatggtcgactgtttggctct
atttccttgtgctgtctggtagagcatgagtgcgtttctgatttgtccctgacgctggcg
attgccagagaagtcggcaactctttgctgactgatagcctgctagccgaatctaaccgc
catctgaatcagatgtacggactgctggaaagcatggatgatggcgtgatggcgtggaac
gagcagggcgttctgcaatttcttaatgcccgtgccgctttgcttttacatctggatgca
caggccagccagggtaaaaacattaatgacttgctcaatctgcccatgctgctgcgccgg
gcgataaaacatgcccgcggcctgaatcacgtcgaagtcacctttgaaagtcagcatcag
tttgttgatgccgtcattaccctgaagccgattgttgaagagcagggcaacagctttatt
ctgctgctgcacccggtcgaacaaatgcgccaactgatgaccagccagctcggaaaagtc
agccacacctttgaacagatgtcgacggatgacccggaaacccgtcggctgatccatttt
ggtcgccaggcggcgagagggagtttccctattctgttgtgtggtgaagagggagtgggt
aaagagctattgagccaggctattcacaatgaaagtgaacgtgccagcgggccgtatatc
gccgtgaactgccaactgtatgccaacagcgtgctggggcaggattttatgggcagtgcg
ccaaccgatgatgaaaacggtcggctgagccgccttgaactggcgaacggcggtacgctg
tttctggaaaaaattgagtatctggcaccagagttgcaatccgcgttgttgcaggttatc
aagcagggcgtattgacccgccttgatgcccgccgcctgatcccggtagatgtcaaagtg
attgctactaccacggttgatctcgccaacctggtggagcaaaaccgctttagccgccaa
ctgtattacgcgttacactcctttgaaattgttattccaccgctgcgggcacggcgtaac
agcattccggcgctgattcatacacgcttaaatagcctgaaaaaacgcttttcatccagc
ctgaagctggacgatgacgcgctggcgcaactggtggcctactcgtggccgggcaatgat
tttgaactcaacagcattatcgaaaatatcgccattagtagcgacaatggccatattcgc
ctgagtaatctgccggattatctgtttgccgaacgtccgggtctggaagcagcatcttca
ctgctgccagccagcctgacgtttaccgccatcgaaaaagaggcgattatccatgccgcc
cgcgtcaccagcggacgtgtgcaggaaatgtcgcaactgttgaatattggccgcaccacc
ttgtggcgcaagatgaagcagtacgacatcgatgccagccagtttaagcgcaaacatctg
gagtag
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