Corynebacterium imitans: CIMIT_11475
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Entry
CIMIT_11475 CDS
T03237
Name
(GenBank) DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cii
Corynebacterium imitans
Pathway
cii03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CIMIT_11475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cii03400
]
CIMIT_11475
Enzymes [BR:
cii01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CIMIT_11475
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CIMIT_11475
DNA repair and recombination proteins [BR:
cii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CIMIT_11475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AIJ34413
UniProt:
A0A076NM31
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All DBs
Position
2405297..2406103
Genome browser
AA seq
268 aa
AA seq
DB search
MPEGHVIHRLAARLNEEFRGAPLQASSPQGRFDASLIDAHTLVRAQALGKHLFLEFSDIF
VHIHLGLIGSLRFEPAEDVWGQIRLRLVPDGGAGDIAANLRGPQTCAYLSPAEVAAIVER
AGEDPLDSDSDPDALWARVHRSKRTIGSLMMDQSYFAGVGNIYRAEPLFRLGISPFTPGR
ALDRAEFDALWEDLVKLMRYGFEHGRIDTVRDIHSPEAMGRAPRKDDHGGEVYVYRRAGQ
PCYVCGEEIALRKVEGRNLFWCPGCQRD
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaggccacgtcattcaccgcctcgccgcacgcctcaacgaagaatttcgcggc
gcgccgcttcaagcctcctcgccgcaggggcgcttcgatgcctcgcttatcgacgcccac
acgttggtccgtgcccaagccctcggcaagcacctcttcctggagttttcggatattttt
gtgcacattcacctggggctgatcggttccctgcgcttcgagccggccgaagacgtctgg
ggccaaatccggctgcggctggtgcccgacggcggggcaggcgatatcgccgcgaacctg
cgcgggccgcagacctgcgcctacctcagcccggcggaagtcgccgccatcgtcgagcgc
gccggcgaggacccgctcgacagtgattcggacccggacgcgctgtgggcgcgggtgcac
cgctcgaagcgcacgatcggctcactgatgatggaccagtcctacttcgctggggtgggc
aacatctaccgcgcggagccgctcttccggcttggaatttcgccgtttacaccagggcgt
gcgctcgaccgtgccgagttcgacgccctgtgggaggacctggtgaaactcatgcgctac
gggttcgagcacgggcgcatcgacacggtgcgggatattcattcgcccgaggcgatgggg
cgcgcgccgcgcaaggacgaccacggcggcgaggtctacgtctaccgccgcgcaggccag
ccctgctacgtgtgcggcgaggagatcgcgctgcgcaaggtggagggccgcaacctattc
tggtgccccggctgccagcgcgactag
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