KEGG   Ciona intestinalis (yellow sea squirt): 100177970
Entry
100177970         CDS       T01056                                 
Name
(RefSeq) splicing factor 3B subunit 4-like
  KO
K12831  splicing factor 3B subunit 4
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100177970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cin03041]
    100177970
Spliceosome [BR:cin03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    100177970
 Complex B
    100177970
 Complex C
   U2 SnRNP specific factors
    100177970
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_5 OB_RNB
Other DBs
NCBI-GeneID: 100177970
NCBI-ProteinID: XP_002119350
Ensembl: ENSCING00000002337
UniProt: F6R683
LinkDB
Position
1:complement(2610042..2614934)
AA seq 375 aa
MAAGPISERNQDATVYVGGLDEKVAEPLLWELFLQAGVVVSTHMPKDRISGSHQGYGFVE
FLAEEDADYAIKILNMIKLYGKPIRVNKASSHQKNLDVGANLFIGNLDPEIDEKLLYDTF
SAFGVILQTPKIMRDPDTGNSKGYAFINFASFEASDAAMEAMNGQHLCNRPISISYAFKK
DSKGERHGGAAERLLAVQNPLSQADRPHTMFADAPSEMPTPLDLAHMDMGMPPPPMSMPG
MPPIGPPMLPPMGMPPGPMPPHPPMGLPPMHGGPPMPPSSMDQSGAMNNQMSWGNPGMGP
PNMMPNNGPPMGMGGPRMGNQFQPRGPPPPMGPPMGPPMPWGPPQNMFDGGMHGPPMRGP
PPNMGGPPMHNMMQR
NT seq 1128 nt   +upstreamnt  +downstreamnt
atggctgctggcccgatttctgaacgtaatcaagatgctactgtatacgtcggaggttta
gacgaaaaagtagcagaaccattgctgtgggaactgtttctacaagcaggagtggtggtt
agcactcatatgccaaaggatcgtatatctggcagccaccagggttatggtttcgtcgaa
tttcttgcagaagaagatgcagattatgcgataaagatattaaatatgataaaactttat
gggaaacctatacgagtgaataaggcatcttcacatcaaaagaacttggatgttggcgca
aatctttttattggaaaccttgatcctgaaattgatgaaaaacttttatacgacactttc
agtgcatttggtgttatacttcaaacacccaagatcatgcgagacccagacacaggaaac
tcaaagggttatgcgttcataaactttgcgagttttgaagcttctgacgctgccatggaa
gcaatgaatggacaacatctctgtaatcgtcccatcagtatttcatacgcatttaaaaag
gattcaaaaggagaaaggcatggtggagcagcagagagactcctagcagtgcagaaccca
ctgtcacaagctgacagacctcacacaatgtttgctgatgctccaagtgagatgcccacc
ccgttagacctcgcacacatggatatgggaatgcctccaccccccatgtctatgccaggc
atgccacctattgggccacctatgttaccccccatgggtatgccccctggccccatgccg
ccccacccacccatgggacttcccccaatgcatggagggccccctatgcccccttcgtca
atggaccagtctggtgctatgaacaaccaaatgagttggggcaacccaggcatgggtcct
cctaatatgatgcccaacaatggacccccaatgggaatgggtggtccaagaatgggtaac
caattccaacctcgaggccccccaccccctatggggcctccgatgggccccccgatgcca
tggggcccgccccaaaatatgttcgacgggggtatgcatggtcccccaatgcggggtcca
cccccgaatatggggggtccacccatgcataatatgatgcagagatga

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