Ciona intestinalis (yellow sea squirt): 100178446
Help
Entry
100178446 CDS
T01056
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 1
KO
K03032
26S proteasome regulatory subunit N2
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
100178446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cin03051
]
100178446
Proteasome [BR:
cin03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
100178446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN2_N
RPN2_C
PC_rep
HEAT_2
HEAT
baeRF_family11
Motif
Other DBs
NCBI-GeneID:
100178446
NCBI-ProteinID:
XP_009861554
LinkDB
All DBs
Position
Unknown
AA seq
943 aa
AA seq
DB search
MHITSAAGVLSLLQEPEDELKVYALKRLNDIVPEFWPEISDHVEQIEVLYEDETFKHREM
SALLASKLYYYLGAYEDSLNYALCAGAAFNVKESSEYVVTTICKCIDHYTKLRVSQHEGK
EVKIDPRLEEIVNRMFENCLEGGQYKQAVGISVETRRLDIFERAVRMTPNLGEMLSYCTT
LCTRLVENKKLREDILKLLVRLHSNLAPSTSKTVTQPDYINICQCLIYLDDASAVADILL
KLIKTGKDQVPMAYQIAFDMYDSASQYFLLGVIEALRNTASYQEDKDSGADLKVEIDQIC
SILDGEKSIELYLQFLIRNNHADLVTLKQTKDQVRNSVCHNACVIANSYMHCGTTIDQFL
RDNLDWLARATNWAKFTATSSLGVIHQRHEKDSLDLMSTYLPKDASGGSAYQEAGGLYAI
GLIHANHGRGKITDYLFSQLSNATNETIRHGGCLGLGLASLGTSNNDVYELLKSNLYQDD
AVTGEAAGLAMGLVMIGSNNEKVLEDMVSYAKETQHEKIIRGLAVGIALVMYGRMDEADV
LIEDLMNDKDPILRRSAMYTIAMAYVGSGSNKANRMLLHVAVSDVNNDVRRAAVESLGFI
LFRTPAHCPSVVSLLSESYNPHVRYGAAVALGIACAGSGNKDALNLLEPLTSDSINYVRQ
GALISSSMILIQHTDTTCPKVKQYKELYKKVINDKHEDVMSKFGAILSQGIIDAGGRNVT
LSLQSRTGHVNMASVVGMLVFCQYWYWFPHAHFLSLAFTPSAIIGLNSDLKMPKMSVRSN
AKPSSFAYPAPLEEKRGREAEKVETAVLSTTAKQKAKEKKEKKRAAGNEGEKMEVENTAK
KVDKKEEEIENMETEKPKEESSFEMLENPCRVILPQLKLITLNDENRYSPLKSIASGGII
LLKDKKPGEPEQLLEPVAAGGPKKEETDEEDEPSPPEPFEFTE
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgcatattacttcagcagcgggtgtgctttctcttcttcaagaaccagaagacgaattg
aaagtttatgcgttaaaacgtcttaatgatattgtaccagagttttggccagaaatatca
gaccatgtggaacaaattgaagttctttatgaggatgaaacgtttaaacatcgagaaatg
tcggctttactcgcatcaaagttgtattattatcttggcgcttatgaagattcattgaat
tatgccctttgcgctggtgctgcgtttaacgttaaggagagttctgaatatgtggttact
acaatttgcaaatgcattgaccattacacgaaacttcgggtcagccaacacgaaggtaaa
gaagtaaagatcgatccccgacttgaagaaattgtcaaccgaatgtttgagaattgtttg
gagggagggcagtataaacaagctgttgggatctctgtggaaactagaaggcttgatata
tttgaacgagcggtcagaatgacgccaaaccttggtgaaatgttgtcttactgcacaact
ctatgcacaagattggttgagaataaaaaacttcgcgaagatattttgaaacttcttgtt
cgtcttcattccaatcttgctccttccacgtcaaagacagtaactcaaccagactacatc
aatatttgtcaatgcttgatatatcttgatgatgcttcagctgttgcagatattttgtta
aaactgatcaaaactgggaaggaccaagtacctatggcttaccaaatagcgtttgatatg
tacgacagtgcttcacaatatttcttacttggagtgattgaagcgttgcgcaatactgct
tcctatcaagaggataaggattctggtgcagatttaaaagttgaaatcgaccaaatctgt
tcaatcttagatggagagaaaagtattgaattgtatttgcaatttcttataaggaataat
catgcagacctagttacattgaaacaaactaaagatcaggttcgcaactcggtgtgccac
aacgcatgtgtgatagccaacagttacatgcattgtggaacgacaattgatcagttcctt
cgggataacttagattggttggcgagggcaacgaattgggccaagttcacagccacgtcg
agtcttggggtcattcatcaacggcatgaaaaggattcattagacttgatgtcaacctac
cttccgaaagatgcgagcggggggagcgcctaccaggaagctggggggttgtacgctatt
gggctcatacatgcaaaccatggaaggggaaagattactgattatttgttcagtcaactc
agtaatgctactaatgagacaattagacatggggggtgtctgggtttggggttggcttcg
cttggaacatccaataatgatgtttacgaattattgaaaagtaatttataccaagacgat
gcggtgactggtgaagctgccgggctggcaatgggattggtcatgataggttcaaacaac
gagaaagttttggaagacatggtgtcttacgccaaggaaactcaacacgagaaaatcatc
cgagggttggcagtggggatcgctttggttatgtacgggcgaatggacgaggccgacgtt
cttatcgaagatttaatgaacgataaagatccgatcctcagaagatccgcgatgtacacg
atagctatggcttatgtaggatcggggtcgaataaagctaacaggatgttgctgcacgtg
gctgtatctgacgtaaacaacgacgttcggcgagcagcagtcgaaagccttgggtttata
ttgttcagaacgcccgcccattgcccgagcgttgtttcgcttctatcggagagttacaac
cctcatgttcggtatggagcggcggttgctttgggtattgcttgcgctggtagcggaaat
aaggacgccttaaatttattggaacctctcacaagtgattcaatcaactacgtccgacaa
ggagcgctcatttcttcgtccatgatattaatccaacatactgatactacttgtcccaag
gttaaacaatacaaggaattgtacaagaaagtgataaacgacaaacacgaggacgtcatg
tcaaagtttggagctattttatcgcagggaattatcgatgcagggggtagaaacgtcaca
ttatcgctgcagtcacgcacaggacacgtcaacatggcgtctgttgtgggtatgttggtg
ttctgtcagtattggtattggtttcctcacgcccatttcttgtctcttgcttttacaccg
tctgccattattggtctcaactcggatcttaagatgccgaagatgtcagttcgttcgaac
gcaaagccgagcagtttcgcttaccccgccccacttgaggaaaaacgagggcgtgaagcc
gagaaagttgagacggctgtcctatctaccacagccaagcagaaagcaaaggagaagaaa
gaaaagaagcgagcggcgggcaacgagggggaaaagatggaagtggaaaacacggcaaag
aaagtcgacaagaaagaagaagagattgagaatatggaaactgagaaaccaaaagaagaa
tcttcatttgagatgttggaaaatccatgcagagttattctaccgcaacttaaacttatc
actttgaacgacgagaacagatattccccacttaaatcgattgccagcggagggatcatt
ttgctcaaagataaaaaacctggcgagcctgaacaattgcttgaaccagttgcagctggc
gggccaaagaaagaggaaacggacgaggaagacgaaccatctcctcccgaaccattcgaa
ttcacagagtag
DBGET
integrated database retrieval system
