Ciona intestinalis (yellow sea squirt): 100179283
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Entry
100179283 CDS
T01056
Name
(RefSeq) glial fibrillary acidic protein-like isoform X2
KO
K07610
desmin
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100179283
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cin04812
]
100179283
Cytoskeleton proteins [BR:
cin04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
100179283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
DUF5426
DUF1664
Crescentin
Tropomyosin
Pox_A_type_inc
Motif
Other DBs
NCBI-GeneID:
100179283
NCBI-ProteinID:
XP_002119114
Ensembl:
ENSCING00000001690
LinkDB
All DBs
Position
Unknown
AA seq
439 aa
AA seq
DB search
MDSSDYRYSGGAKAGTSSYQLRYGGNRFVGARRSYGGRSSGVIEAPITRVTVSDGLELTP
SLMTSRSEEKAELGSLNDRFVSYIDKVRSLTAVNRTLEIKIKQLEANRVVPSRSGQLYEA
QLHKLQRELEKAVVEKTRIEIELENCYRELDAIRLKLEREEEDRKFAEEESASLRKDVDQ
ATLARTELETKVESLQEELDLVRRSTDEDIRVLTEQLSSTTVYSENVDEPTTDLSESLKD
VRAAYERLTQKNKIEIEGYYKTKISDLQNQLKEEAGTNKSSKTEVLELRRQLQSVTNELE
STANNNSAIETQLQELDIRYHNEVAGYQQKLMDMEAELSLTRDRVARQLVDYNELLNIKL
SLDFEIKTYRKLLEGEENRINVSSSSVNYNGELSTEGDVISKVVTVEERKVVIRKESEND
EKNSSSSSSSSSSESESEI
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggattcttccgattacagatacagcggcggtgccaaggcaggcacttcgagctaccaa
ctacgctatggtgggaaccgctttgttggcgcacggagaagctatgggggtcgttcttca
ggagtgattgaagcgccaattactcgagtaaccgttagtgatggtttggagcttactccg
tcactgatgacgtcacgatccgaagaaaaagcagagctaggttcattaaatgatcgtttc
gtttcttacatcgataaagttcggagtctcactgcagtaaaccggacactggaaattaaa
attaaacagcttgaagcaaacagagttgtcccgagtagatccggtcaactatacgaagcc
caactacataaactacagcgggagttggaaaaggccgtcgtagaaaaaacaagaatcgaa
attgagctcgaaaattgttacagggaattggacgcaatcagacttaaattggaacgagaa
gaagaagatcgaaaattcgcggaggaagaatcggcatcactgcgcaaggatgtagatcag
gcaacactggcaagaactgagttggaaacgaaggtggaatcactgcaagaggaactggac
ctagtgcgaagatcaacggatgaggacatccgagttttaaccgagcagctctctagcacc
accgtgtattcggaaaatgttgacgaaccgacaactgatctttcggaatctttgaaggac
gtccgtgcagcttatgaacgtcttacacagaagaataagatcgaaatagagggatattat
aaaactaagatttctgatttgcaaaatcaactaaaagaagaagctggaacaaacaaatct
tctaaaacagaggttcttgaattgaggcgacaactgcagagcgtcacaaatgagttagag
tcaacagcaaataataactctgccatcgagactcaattacaagagctggatattcgttac
cacaacgaggtcgccggatatcaacaaaagctcatggacatggaagcagaattgtcattg
acacgtgatcgcgtggcgagacaactggtcgattacaatgagttgctgaatataaaactt
tcgctagatttcgaaatcaaaacttacaggaaacttttggaaggcgaggagaatagaatc
aacgtcagttcgtcgtccgtgaactacaacggtgaattatctactgaaggtgacgtcatc
agcaaggtggtcaccgtggaggagcgaaaagttgtgattcggaaagagagtgaaaacgac
gaaaagaactcttccagcagctcgtcgtcgtcttcatcggagtcggagagtgagatctaa
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