Ciona intestinalis (yellow sea squirt): 100180981
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Entry
100180981 CDS
T01056
Name
(RefSeq) fibropellin-1-like isoform X1
Organism
cin
Ciona intestinalis (yellow sea squirt)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_2
EGF_CA
CUB
DL-JAG_EGF-like
EGF_3
Motif
Other DBs
NCBI-GeneID:
100180981
NCBI-ProteinID:
XP_018670498
LinkDB
All DBs
Position
Unknown
AA seq
976 aa
AA seq
DB search
MRQRLKFYQRGLLTQLTIFMLLRGITAQRSIPGCGADLATKQGVITSPGYNRNYQHNLEC
IWNIQFKNTDQIAFYVRDLVMENGQCLKDYIEITFSDKKAPRVCGFRPPRRPIVGAGPAT
VKFVSNGGVSYRGFYIQYAVTEGVLKPPDPCASNPCQNGGTCTTQGSKYVCTCVDGFAGT
DCETVVESSTVDHCDPNPCQNDGTCTDTGDGYSCACADGWTGDTCAEDIDECASNPCLND
GTCENEMNQFTCSCVAGFTDTTCSTNIDECESNPCQNGGECTDDVNMFTCTCQSGWTGDL
CQEDIDECSSDPCLNGGECENGQNQFTCSCKDGYSGDTCEIDINECESEPCQNGATCENE
VAAFTCLCVDGWSGSMCEINVNECDSSPCQNGGSCTDGQNEFTCECAEGWEGITCETEVV
PEAIPEVNECASNPCQNGGTCEDGDNKFTCVCVAGWTGVNCEDNVNECDSSPCLNGGECN
DGVNEFTCTCTQRWTGLLCDNLLDSCLSDPCKHGGTCTNDESGYSCDCASGWSGKTCEVE
AEPDKDYCSPNPCRNGGSCTNKKDGFDCECAPGFRGLTCVQDVDECASNPCLNGGRCRNN
RNAYSCQCQDGYTGSRCENAPATIEEGDPDDICNPNPCMNEGECHDLGDGEPFCFCQDGF
EGDLCEEGENNCIPNPCENSGTCVLWGESFTCTCSRGFEGETCSKDIDECASNPCEGDLV
CVDKPNAYVCRMECDPGYTGEFCDVEIDECDPNPCLNGATCIDELAAYQCTCVAGYNGTD
CEYEAPCSSSPCENSGSCEQIKKSNTTSYRCLCNIGWAGVNCQTEVSSGCSNPHGGAGFI
PFGASLEISCEVGFVLTGSERVTCLDSGDFDGPIPQCILNGTSPSAVGKGGKLKMSPLVI
SMMAAGGVVAVAIAGFLSYVFIFAPWNAPAVKAKIAASTAKAGKPALSKGADTSLAKKIV
KAKSAKIDAQPPKTKK
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgaggcaacgactaaagttttatcagcgaggacttttaacccaattgacgattttcatg
ctgctacgtggaattacagcccaacgtagtattccaggttgtggagctgatctggcaacg
aaacaaggcgttattacatcacctggatataatcgaaactaccagcacaatcttgagtgc
atatggaacatacagtttaaaaacacggatcaaattgcgttttatgttcgagatttggtg
atggaaaacggccagtgtctaaaggattacattgaaattacattttccgataaaaaggcc
ccgcgagtatgcgggtttcgtcctccacgaagaccaattgttggggctggaccggctact
gttaagtttgtcagcaatggtggggtcagttacagaggattttacatacagtatgctgta
actgaaggtgtgttgaagccgccggacccatgtgcatccaacccatgccaaaatggaggg
acatgcacaactcaaggaagcaaatacgtttgtacttgcgttgacggctttgctggcacg
gattgcgaaactgttgttgaatcaagtacggtagaccactgtgacccgaatccttgtcaa
aatgatgggacctgtacagataccggggacggttacagctgcgcatgcgcagatggttgg
actggtgacacatgcgctgaagatatcgacgagtgtgcctcaaatccttgtctcaacgac
gggacttgtgaaaatgaaatgaaccaattcacttgttcgtgtgtggctggttttactgat
acaacctgctcgacaaatattgacgaatgcgaatcaaatccgtgccaaaacggtggcgaa
tgtactgacgatgtcaatatgtttacttgtacctgtcaatcgggatggaccggtgatctg
tgtcaagaagatattgatgaatgctcatcggatccgtgtcttaatggtggagaatgcgaa
aacggacaaaaccaattcacctgctcctgcaaagacgggtacagcggtgatacttgcgaa
atcgatatcaatgagtgcgagtcggagccttgtcagaatggcgctacatgtgagaacgaa
gtggcggcgtttacttgtttatgtgttgatggctggtcaggatcgatgtgtgaaataaat
gtgaatgaatgtgactcttctccgtgtcaaaacggaggttcgtgcacagacggtcagaat
gagtttacttgcgaatgcgctgaaggctgggaaggcattacttgtgaaaccgaagttgtc
cctgaagcaataccagaagttaacgaatgtgcttcaaacccttgtcaaaatggcgggaca
tgcgaggacggtgacaataaatttacttgtgtttgtgttgctggatggactggcgttaac
tgcgaagacaatgttaatgagtgcgactcaagcccttgcttgaatggtggagaatgtaac
gacggtgttaatgaatttacttgtacttgtactcaacgttggacagggttgctttgtgat
aatttactggactcgtgcttgtccgatccctgtaaacacggtggaacttgtactaacgac
gaaagtggatacagctgtgactgcgcaagcgggtggtctggaaagacttgtgaagtagaa
gccgaacccgataaagactattgctcgccgaatccatgtaggaacggtggaagctgtacg
aacaagaaggacggatttgactgcgaatgtgcacctgggtttcgtggcttgacatgcgta
caggacgtggacgaatgtgcctcgaatccgtgtctaaacggtggacgctgcagaaataat
cggaacgcgtactcctgtcagtgccaagacggatacacaggatctcgatgcgaaaatgca
cctgctacaattgaggaaggagatcctgacgacatttgtaatccaaatccgtgtatgaat
gaaggggaatgtcatgacttaggagatggagaaccgttttgtttctgtcaggacggtttt
gaaggcgatttatgcgaagagggcgaaaacaattgcattccgaatccgtgtgagaattca
gggacttgtgttttatggggagagagttttacttgcacttgttccagggggtttgagggg
gaaacttgttcaaaagatatcgatgaatgtgcttccaacccgtgtgaaggcgatttagtt
tgcgttgacaaaccgaacgcgtacgtctgcagaatggaatgcgaccccgggtatactggt
gaattttgcgacgtggaaattgacgaatgtgacccgaatccgtgtctcaatggtgcaaca
tgtatagacgaacttgcagcatatcagtgtacctgtgtagcaggttataacgggacagac
tgtgagtatgaggcgccatgtagtagcagcccttgtgagaacagcggatcttgtgaacag
atcaaaaaaagcaacactacttcatacagatgcttgtgtaatataggatgggcaggagtg
aattgtcaaacagaagtttcttcgggctgttccaatcctcacggtggtgctggtttcatc
ccgttcggagcgagtctggaaatttcatgtgaggtcggatttgtgcttactggatcagaa
cgcgtcacgtgtttagactctggcgattttgatggaccaattccacaatgtatcctaaat
ggaacatctccgtctgcggttggaaaaggagggaagttgaaaatgtcgccgttagttata
agcatgatggcagccggaggtgtagttgcagttgctattgctggatttctgtcatacgtt
ttcattttcgcaccttggaatgctccagcagttaaagcgaaaattgccgcgtcaactgct
aaagcgggaaaaccagcgttaagcaaaggggcagacacttcgttggctaagaaaatagta
aaggccaagagtgcgaaaatcgatgctcagcctccgaaaacaaagaaataa
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