Ciona intestinalis (yellow sea squirt): 100181771
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Entry
100181771 CDS
T01056
Name
(RefSeq) gamma-tubulin complex component 6 isoform X1
KO
K16573
gamma-tubulin complex component 6
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cin03036
]
100181771
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cin04812
]
100181771
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
gamma-tubulin ring complex
100181771
Cytoskeleton proteins [BR:
cin04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
100181771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCP_C_terminal
GCP_N_terminal
DUF2535
HJURP_C
Motif
Other DBs
NCBI-GeneID:
100181771
NCBI-ProteinID:
XP_026691969
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Position
1:complement(3547392..3568918)
Genome browser
AA seq
1315 aa
AA seq
DB search
MDKSHEKSFNKCVEQLAKIFVAKSRKSKEGKQRNGKVSLLSEEIKLKWKIYDSMFDSKKL
SHHRNGSYYWKLLFDNSMNVSLVLEMFRFSNQCDIDGLLQTSGFGLDDCVERVLCLLLCL
ARKPSKDKQDDQLTLYNSKLNCKKINFDYSHVYFGPSKFNEEEVECGWSQLNTYRLPLLL
PESTAQQKIQVAFNHHTNTPSNVDGFSFVNPKTKPYFGCLKFPDLLSDVYDGKIVQDEDE
GFVSGGSTPCSVKMLRNTQSRVNDSHPPYYDYRAPNYDVRDWAKCLSTKRRTYFSWDLNR
GDPHNKEYYFTELGSNAYDVVWMSRLRLVVDLTNFLQQQQQNNKLILVEETVLLSHSCLV
VVGVASDTFQYNKLAQMFVVPSKVYMCGVTPSSVRNCLHQFAECGTAYRRVMLFTSNILK
STTKINNWIQNTECILMTFCEAVQQYLHYFQENMLHYSNQCKTLQELSLALQQPTALIHY
MCQLCKCGSPDVPLTQPDVDGSIFPTGVSLLTYLYEEALHSTDANERFILLYLLQKCCQP
YLSFVQSWVFRGLCVESSDEFMININDNNGGKRDRRRWKNYIVARNPNDIKSCVPLFLAP
IAEKMFACGKSIELMQLISPQHFLCTQMFPLPQLRMSYSKIEMKKQMMKWKEYQSLLQAQ
EDEMILFWEEEEKSRERKRQELVNASHEVYQTQMEKLFDEKKQIILEIQQNKKTEYDRLK
KQAEDDLNRRKMEKEKEASDDLHRLQMNEYRDTLHKHTDDKLFAQVKEEMEQRYAQLTRD
AENREARALWKIKRHRLDNKRILFLQNQVIPEHFIKSTSTSVKNIEENHLVEIDTPLVDI
VENVESSVDENVDQEVDEINQHQHVESITVNVDDATKLQNKELSAEKVRKPKLKPTKEKQ
VHHSQSTIQNLMYYGDKEKIVSSNDIVAKRNEPCVEDSYINATTPETDHPLPTFNVYDDH
VTSIFKVFNSTNNGDKFERCRELFPTQKHSGINNSTFFTDQEDIVAADLDALPVMLLKCV
LHPISVHSDLVNRCVVQHFMQNLSLVDHFEMLRHFLLLEDGEFSQTFSNNLFHIIHGNTN
PVDSLTPVALDSILSRSVQSSNFHDSSLIGNLFFSLTHLPPAFDPLDRDCLNCFELRYNT
PWPCNIVLTESSHTKYNQVLRFLLQLKHLIWVLHDVRNQLCHIESGVTSLFRLTASELRI
LHIYRHEMHNFVKIMQGYVSTQVLHVCWKEFLDSLQTNVTNLEDIYLRHSEYIHKCVLRC
LLTPKAQSVFNLIRDALKCILRFHKQLSSPKSATFRALKQTYLEFSRLSNFLYKG
NT seq
3948 nt
NT seq
+upstream
nt +downstream
nt
atggacaagagccatgaaaaaagttttaacaaatgtgtggaacagttggcgaaaatattt
gttgctaaatctcgtaagtcgaaagaaggaaaacaaaggaatggaaaggtgtcgcttctc
agtgaagaaatcaagttaaaatggaagatatatgattctatgtttgatagtaaaaagcta
tctcaccatcgtaatggttcatattactggaaattgttgttcgataattcaatgaatgtt
tctcttgttttggaaatgttccgattcagtaaccaatgtgatattgatggtttactacaa
acaagtggatttggtttagatgattgtgtggaaagggtgctttgccttttattgtgtctt
gccaggaaacccagcaaggataaacaagatgaccaactaactctctacaacagcaaacta
aattgcaagaaaatcaacttcgattattctcatgtttactttggcccatcgaaattcaat
gaagaagaagttgaatgtggttggagtcagttaaatacgtataggttgccattattattg
ccagaatccacagctcaacagaaaattcaagttgcatttaatcaccatacaaacacgcct
tcaaacgtagatggttttagttttgttaatccgaaaaccaaaccatattttggatgtttg
aaatttcctgatttattgagtgatgtttatgatggcaaaattgttcaagatgaggatgaa
gggttcgtgtctggtggaagtactccatgttctgtgaaaatgttgcgcaatacccagtca
cgggtgaatgattctcaccctccgtattatgactacagagcaccaaattacgatgtaaga
gattgggcgaaatgtttatcgacaaagagaagaacttatttttcctgggatttaaacaga
ggtgacccgcacaacaaggaatattatttcactgagcttggttcgaacgcatatgatgtc
gtgtggatgtcacgtcttcgtctcgttgttgatttaacaaacttccttcaacaacaacaa
caaaacaacaagttgattcttgttgaggaaacagtgttgttgtctcactcatgtcttgtt
gttgttggagtagcttcagatacttttcaatataacaagcttgcgcaaatgtttgttgtt
ccaagtaaagtttatatgtgcggtgttacgccatctagtgtaaggaattgcttgcaccag
tttgcggaatgcggaactgcatatcgacgtgtcatgctgtttacatcaaatattttaaaa
tctaccacgaaaataaacaattggattcaaaatacagagtgtatactcatgacattttgt
gaagctgtccagcaatatctacattacttccaagagaacatgcttcattattcaaaccaa
tgtaaaactttacaagaactttcacttgctttacaacaacccacagctttaatacattac
atgtgtcagttatgcaaatgtgggtcacctgatgttccgcttactcaaccagacgttgat
ggatctattttcccaactggtgtctcgctacttacatatctatatgaggaagctttgcat
tctacggatgcaaacgaacgatttattttgttatatcttctgcaaaagtgttgccaacca
tatttaagtttcgtgcagagttgggtgtttcgtggactgtgcgttgaatcaagcgatgaa
ttcatgatcaacatcaacgacaacaatgggggaaaacgagacaggaggaggtggaagaat
tatatcgttgcgaggaaccccaacgatatcaagtcatgtgttccgttgttcttagctccg
attgctgagaaaatgttcgcgtgcggaaaatcaatcgaacttatgcagctcatttcacct
cagcattttctgtgcactcaaatgttcccattacctcaattacgaatgtcgtactccaag
attgagatgaagaagcagatgatgaaatggaaagaatatcaatctctcctccaggcacaa
gaagatgagatgatcttgttttgggaggaagaggaaaagtcccgagagagaaaaagacag
gaattggtgaacgcttcacatgaggtgtatcaaacacaaatggagaagttgtttgatgaa
aagaaacaaattattcttgaaattcaacaaaacaagaagacggaatatgacagacttaaa
aaacaagcagaagatgatttaaacaggagaaaaatggaaaaagagaaagaagcatccgat
gacttacaccggttgcagatgaatgaatacagagatacacttcataaacatactgatgat
aaattatttgctcaagtcaaggaagaaatggagcaacgttatgctcaacttacacgcgat
gctgagaacagagaagcaagagctttgtggaaaataaaacgtcatcgactggataacaag
cgaatcttatttcttcaaaatcaggttatacctgagcactttataaaatctacatcaacc
agtgtgaaaaatattgaagaaaatcatttagttgaaattgatacaccacttgttgatatt
gtggaaaatgttgaaagttctgttgatgaaaatgttgatcaagaagttgatgaaataaat
caacatcaacatgttgaatcaattactgttaatgttgatgatgcaactaaacttcaaaac
aaagaattaagcgcagaaaaagttaggaaaccaaaactgaaaccaacgaaagaaaaacaa
gttcaccatagccaatctactattcagaatctcatgtattatggggataaagaaaagatt
gtaagctcgaatgacattgttgcgaaaagaaatgaaccttgtgttgaagactcatatatc
aatgcaacaactccagaaacagatcacccattaccaactttcaatgtatatgatgatcat
gttacttctattttcaaagtatttaactctacaaataatggtgacaagttcgagagatgc
agagaacttttccccacccagaaacacagtgggatcaacaattcaacgtttttcaccgac
caggaagatattgtagctgccgacttggatgctttacctgtaatgttgctaaaatgtgtc
ctacatccaatatctgtgcattccgatcttgtcaataggtgcgtggttcaacatttcatg
caaaacctttcacttgtggatcattttgaaatgttgcgacatttccttttattggaagat
ggagaattttcgcaaacgttcagcaacaacttgtttcatattattcacggaaacacaaat
cctgttgattctttaactccggtcgctctcgattcaattttatctcgttccgttcaatct
tccaactttcacgattcatccttgatcggaaatttatttttctctctaacccatcttcca
cctgcgtttgatccactcgatcgagattgtttgaattgttttgaattgagatacaacacg
ccgtggccgtgtaacatcgtgctcacagaatcatctcacacgaaatacaaccaagtctta
aggtttttgctccaacttaaacacctgatatgggttctacatgacgttcgcaatcaactg
tgccacattgaatccggtgtcacttccttgttccggttgactgcatcggagcttcgtata
ctacatatctatcgacatgagatgcataattttgtgaagataatgcaaggatatgtttca
acacaggttcttcatgtttgttggaaagaatttcttgattcgttgcaaacaaacgtcacc
aacctcgaagatatttatcttcgtcactcggaatatatccacaagtgtgtcttgagatgc
ctgctcaccccgaaggcacaaagtgtgttcaatttgatacgagatgcattgaaatgtatc
ctgagattccataaacaactctcttctccaaaatctgcaacatttcgtgctttaaaacaa
acataccttgaattttcaagattgtcaaactttttatacaaaggttag
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