Ciona intestinalis (yellow sea squirt): 100182534
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Entry
100182534 CDS
T01056
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
KO
K12184
ESCRT-I complex subunit VPS28
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100182534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100182534
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cin04147
]
100182534
Membrane trafficking [BR:
cin04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
100182534
Exosome [BR:
cin04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100182534
Exosomal proteins of other body fluids (saliva and urine)
100182534
Exosomal proteins of colorectal cancer cells
100182534
Exosomal proteins of bladder cancer cells
100182534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
PP4R3
Cytochrom_B562
Motif
Other DBs
NCBI-GeneID:
100182534
NCBI-ProteinID:
XP_002131096
Ensembl:
ENSCING00000010116
UniProt:
F6PIG9
LinkDB
All DBs
Position
Unknown
AA seq
208 aa
AA seq
DB search
MSTVRPELYQEVKLYSNAREREKYDNLAELYSIIKTLQALEKAYIKDSITAKDYTGACSK
MLEQYKVAFRQVKTEVSTLDEFVKRYKLEDCHAALERIREDRPITIPDDGGNTSKCVADI
VSLFITVMDKLRLDIRAMDELHPDLKDLSESMSRMTTLPMNFEGRTKVQAWLTTFAGMAA
SDDLTDPQARQMLFDMDSAYNAFNRFLA
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactgtacgaccagaactctaccaggaagtaaagttatacagcaatgctcgagaa
agagaaaagtatgacaacttggctgaactttattcaattataaaaactttacaagctttg
gaaaaagcatacatcaaagattctattacagcaaaagactacacaggagcctgttccaaa
atgcttgagcaatacaaagtcgctttccgccaggtgaaaactgaagtctcaacgctggat
gagtttgtgaagagatacaaacttgaggattgtcatgcagcattggaaaggataagggag
gatcgaccaattaccatccctgatgatggaggcaacacaagcaaatgtgttgctgatatt
gtttcgttgttcatcacagtcatggataagttgcgacttgacatccgtgcaatggatgaa
ctacatcctgatcttaaagatttatcagagagtatgagtaggatgacgactcttccaatg
aattttgaaggaagaacgaaagttcaagcatggcttaccacatttgcgggaatggcagca
tcagatgatctcacagatccacaagcccgacaaatgctgtttgacatggactctgcatac
aatgctttcaacagattccttgcatga
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