KEGG   Ciona intestinalis (yellow sea squirt): 100182534
Entry
100182534         CDS       T01056                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
  KO
K12184  ESCRT-I complex subunit VPS28
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:cin00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100182534
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cin04131]
    100182534
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cin04147]
    100182534
Membrane trafficking [BR:cin04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    100182534
Exosome [BR:cin04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100182534
  Exosomal proteins of other body fluids (saliva and urine)
   100182534
  Exosomal proteins of colorectal cancer cells
   100182534
  Exosomal proteins of bladder cancer cells
   100182534
SSDB
Motif
Pfam: VPS28 PP4R3 Cytochrom_B562
Other DBs
NCBI-GeneID: 100182534
NCBI-ProteinID: XP_002131096
Ensembl: ENSCING00000010116
UniProt: F6PIG9
LinkDB
Position
Unknown
AA seq 208 aa
MSTVRPELYQEVKLYSNAREREKYDNLAELYSIIKTLQALEKAYIKDSITAKDYTGACSK
MLEQYKVAFRQVKTEVSTLDEFVKRYKLEDCHAALERIREDRPITIPDDGGNTSKCVADI
VSLFITVMDKLRLDIRAMDELHPDLKDLSESMSRMTTLPMNFEGRTKVQAWLTTFAGMAA
SDDLTDPQARQMLFDMDSAYNAFNRFLA
NT seq 627 nt   +upstreamnt  +downstreamnt
atgtcaactgtacgaccagaactctaccaggaagtaaagttatacagcaatgctcgagaa
agagaaaagtatgacaacttggctgaactttattcaattataaaaactttacaagctttg
gaaaaagcatacatcaaagattctattacagcaaaagactacacaggagcctgttccaaa
atgcttgagcaatacaaagtcgctttccgccaggtgaaaactgaagtctcaacgctggat
gagtttgtgaagagatacaaacttgaggattgtcatgcagcattggaaaggataagggag
gatcgaccaattaccatccctgatgatggaggcaacacaagcaaatgtgttgctgatatt
gtttcgttgttcatcacagtcatggataagttgcgacttgacatccgtgcaatggatgaa
ctacatcctgatcttaaagatttatcagagagtatgagtaggatgacgactcttccaatg
aattttgaaggaagaacgaaagttcaagcatggcttaccacatttgcgggaatggcagca
tcagatgatctcacagatccacaagcccgacaaatgctgtttgacatggactctgcatac
aatgctttcaacagattccttgcatga

DBGET integrated database retrieval system