Ciona intestinalis (yellow sea squirt): 100186755
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Entry
100186755 CDS
T01056
Name
(RefSeq) vacuolar protein sorting-associated protein 33A
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04140
Autophagy - animal
cin04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100186755
04148 Efferocytosis
100186755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cin04131
]
100186755
Membrane trafficking [BR:
cin04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
100186755
Hops complex
100186755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
zinc_ribbon_10
Motif
Other DBs
NCBI-GeneID:
100186755
NCBI-ProteinID:
XP_002120775
Ensembl:
ENSCING00000021626
LinkDB
All DBs
Position
Unknown
AA seq
603 aa
AA seq
DB search
MSVGNNSAPHLSGSCVNFGLIRDEARRELVHLLDKCHGSKALVWDQELTEQFGLVAEYSL
LKEREVDRMFPLRTPRLPKSSVQHIIFVTRPVISLMDVIASNIRKEEEGDGFGRKEFHIF
FVPWKSFLCVQKLEDLGVYGALTNIEDYHLDLIALDSDVLSMENHLNFYDNNISEDGTSL
YLAAKAITRIQKQYGQIPMIYGKGKSCKAICSLLQKMWSEQGDVVGDEHPQIDRLLIIDR
TADLITPLVTQLTYEGLIDEAYGISNTSASFPPEKFQTTSKSEDLMTEKKKIVLTSKDDL
FTILRNCNFNAVGPTLKKQAKSISEKYEERHTAKTVGEMKQFVSHLPQMQQAKASLAVHT
NIAELIKEFTDEDDFMESLSTQQEFLNGIGTDKVNPYIEDCLFRKQPIVQVLRLICLQCQ
TNNGLKPKVLEYYKREIVQTYGYKHLITLNKLEKCGLMCGTGTSWNYNTVRKSLRLVVDD
INEKEPQDIAYVHSGYAPLSIRLAEILSHPGWRSIDEVLRIIPGPTVSGLQQFKPKKKWQ
GSINSEGSSPNTVTLVFFVGGVTYAEVSALRFLSAKNDGHEYLTATTNFVNGNTLIQSMV
EPD
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgggaaataacagtgcaccacatttgagcgggagttgtgttaactttggatta
attagagacgaagcaagacgagaacttgtgcatcttttggacaaatgccatggtagtaag
gctttagtatgggaccaagaattgacggagcaatttggtttggtggctgaatattccttg
ttaaaagaacgagaagtggatagaatgttcccgttacgaacaccccggcttccaaaatca
tcagttcagcacatcatctttgtaacgaggccggtgatttctttaatggacgtaatcgca
tcaaatataagaaaggaagaagaaggagatggttttgggagaaaagaattccatattttt
tttgttccatggaagagttttttatgcgtacagaagctagaggatcttggagtgtatgga
gcgcttacaaatattgaagattatcatcttgatctaattgcgctcgactctgatgtttta
tccatggagaaccatctaaatttctatgacaacaacatcagtgaagatggaacttctctt
tatttggctgcaaaagcaatcactcgtatacagaagcagtacggacaaattccaatgatt
tatgggaaaggaaagtcatgtaaagcaatctgtagccttcttcagaaaatgtggagcgag
cagggggatgtggtaggcgatgaacatcctcagattgatcgtctcctgatcattgataga
actgctgacttgataactcctctcgtaacgcagctaacatatgaagggttaattgatgaa
gcttatgggataagcaacacaagcgcttcatttccgcctgaaaagtttcaaaccacctca
aagtcagaagacttaatgacagagaagaagaagatagttttaacatccaaagatgatctt
ttcaccatccttcgtaactgcaacttcaatgctgttggaccaactctgaaaaaacaagca
aaaagtatttcagaaaagtatgaggagcgacacacagccaagacagttggagaaatgaaa
cagtttgtttctcatcttccacaaatgcaacaagcaaaagcctcgttagctgttcatacc
aacatagctgaacttataaaggaattcacagacgaagatgactttatggaatctctcagc
actcaacaagagtttttaaatggtattggaacagataaagtgaatccatatattgaggat
tgcctctttcgtaaacaacctattgtacaagttcttcgacttatttgtcttcagtgccaa
actaataatgggttgaaaccaaaggtgttggaatattacaaacgtgaaattgtgcagacg
tatggttataaacacctgatcactttaaacaagttggaaaaatgcggattgatgtgtggt
actggtacttcatggaattacaacactgttcgtaaatcattgagacttgtggtggatgat
attaatgagaaggaacctcaagacatcgcttacgtacacagcgggtacgctccgttgagc
atcagactcgctgagatcctctcccatccaggatggaggagcattgatgaagtcctccgg
ataattcctggtcccaccgtctccggacttcaacagtttaaacctaaaaagaaatggcaa
ggaagcattaacagcgaaggcagttctccaaacacagtcacacttgtgtttttcgttggt
ggcgtgacatatgctgaagtatcagcgctgcggtttctctcggcgaaaaacgacggtcac
gaatacctcaccgcaacaacgaactttgtgaatggaaacacgttgatccaatcaatggtt
gagccggactag
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