Ciona intestinalis (yellow sea squirt): 445730 Help Entry 445730            CDS       T01056                                  Symbol aptx Name (RefSeq) aprataxin   KO K10863   aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72] Organism cin  Ciona intestinalis (yellow sea squirt) Pathway cin03410   Base excision repair Brite KEGG Orthology (KO) [BR:cin00001]  09120 Genetic Information Processing   09124 Replication and repair    03410 Base excision repair     445730 (aptx)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:cin03400]     445730 (aptx) Enzymes [BR:cin01000]  3. Hydrolases   3.6  Acting on acid anhydrides    3.6.1  In phosphorus-containing anhydrides     3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase      445730 (aptx)     3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase      445730 (aptx)     3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase      445730 (aptx) DNA repair and recombination proteins [BR:cin03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Other BER factors      445730 (aptx)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Other NHEJ factors      445730 (aptx) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DcpS_C FHA_2 zf-C2HE HIT FHA Motif Other DBs NCBI-GeneID:  445730 NCBI-ProteinID:  NP_001027704 Ensembl:  ENSCING00000008741 UniProt:  P61802 LinkDB All DBs Position 7:complement(4549163..4552311) Genome browser AA seq 380 aa AA seqDB search MRILYRLLKMADDTVKCYLECCKSSHPKLPLPHNVPVIIGRTPELGITDKLCSRSQLELT SNCYKRYVLVKRLGANTSQINGIDIEKNKSSRLEEGQDLHVVNGKFPHRVYFTGCQNDTK TEKAVVPKLPTKSTDLTKSDLSIKQPERKKLKVSENKSKVLNSKIKPQEKFSSESVYAFD SPSPMSSRCEKKAESNKRAPTHKHWSQGLKASMEDPELVVKEDEQIVVIKDKYPKAKYHW LILPKDSISSTKNLSTDNIELLKHILKVGQELAAEVKDKQPDVEFRFGYHAVASMSQMHM HVISQDFQSSSFKTKKHWNSFTTDYFVDATDIINELETGGKVKDRRTMTSLLNEPLKCHR CKKPQKNIPTLKKHIDSCQK NT seq 1143 nt NT seq  +upstreamnt  +downstreamnt atgaggatattgtatcgcttgttaaaaatggctgacgacacggttaaatgttatttggaa tgctgcaaatccagtcatccaaaactacctcttccacacaacgtgcctgttattataggg agaacaccagagcttggtattaccgataaactttgctcacgaagtcaattggaattgacg tcaaactgctacaaaagatatgttttagtgaagagacttggtgcaaatacatcacaaata aatggaattgacattgaaaaaaataaatcctcgcgtttggaagaagggcaagaccttcat gttgttaatgggaaattcccacacagggtttattttacaggttgccaaaatgatacaaaa actgaaaaagctgtggtccctaaactcccaaccaaaagtacagatcttacaaaatctgac ttgtccataaaacaacctgaacgaaagaaattaaaagtttccgaaaacaagtctaaagtt ttgaactctaaaattaaacctcaggaaaaattcagcagtgaatctgtgtatgcgtttgat tcaccaagtcctatgagttcacgatgtgagaaaaaggctgagtcaaataaaagagctcca acacataaacactggtcacaaggattaaaagcttcaatggaagacccagaacttgtggta aaggaagatgaacagattgtggttattaaagataaatatccaaaagcaaaatatcattgg ttaattctacccaaagacagcatatccagtacaaagaatttatcaacagataacattgaa ttacttaaacacattttgaaggttggtcaagaactagcagctgaggttaaggataaacaa ccagatgtggaattcaggtttggttaccatgctgtagctagcatgagtcaaatgcacatg catgttatcagtcaagattttcaatcatcgagttttaagacaaagaaacattggaattca ttcaccacggattattttgttgacgcaacggatataataaacgaattagaaacgggagga aaagtgaaagatcgacgaaccatgaccagtttgctcaatgaaccgctcaaatgtcatcgt tgtaagaaaccacagaaaaatattccaactttaaagaaacacattgattcatgtcagaag taa

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