Cellvibrio japonicus: CJA_0002
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Entry
CJA_0002 CDS
T00721
Symbol
dnaN
Name
(GenBank) DNA polymerase III, beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
cja
Cellvibrio japonicus
Pathway
cja03030
DNA replication
cja03430
Mismatch repair
cja03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cja00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CJA_0002 (dnaN)
03430 Mismatch repair
CJA_0002 (dnaN)
03440 Homologous recombination
CJA_0002 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cja03032
]
CJA_0002 (dnaN)
03400 DNA repair and recombination proteins [BR:
cja03400
]
CJA_0002 (dnaN)
Enzymes [BR:
cja01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CJA_0002 (dnaN)
DNA replication proteins [BR:
cja03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CJA_0002 (dnaN)
DNA repair and recombination proteins [BR:
cja03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CJA_0002 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta
DNA_pol3_beta_3
HSP20
Motif
Other DBs
NCBI-ProteinID:
ACE86135
UniProt:
B3PEM3
LinkDB
All DBs
Position
1676..2779
Genome browser
AA seq
367 aa
AA seq
DB search
MKFAVSREALLKPLQLVAGVVERRQTLPVLSNVLIQLEGDQLSLTGTDLEVEIIGRLTLE
QAGQSGEITVPARKLVDICRSLPDGSTIEFFLEENRILVKSGRSRFTLSTLPASDFPNVE
DAPGNLRFSCAQAEVKRLIERTAFAMAQQDVRYYLNGMLWEVRQDHLRVVATDGHRMAMC
TRAIAVNTDDVVQAILPRKGVLELSRLLDDSSAQVEVVLSANHIRVTSVDYTFTSKLVDG
KFPEYERVLPRGGNKVVIGSRLELKQAFARTAILSNEKYRGVRLLLSNGVLTIVANNPEQ
EEAEEQVTVDYTGESLEIGFNVSYLQDVANVISNENIKITLLDANSSALLEEPENSDSLY
VVMPMRL
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgccgtatcccgcgaagccctgttaaaacccctgcaactggtagctggtgtg
gtggaacgtcgtcagacactgccggtattgtccaatgtcctgattcaactggaaggcgac
caattatcgctcacaggtactgacttggaagtagagatcattggtcgcctgactctggag
caggcaggtcaatcgggggagattactgttccggccagaaagttggtagatatctgcaga
tccctaccggatggctccacgattgagttttttcttgaagaaaaccgtattttggtcaaa
tccggtcgcagccgttttactctctcaaccttaccggcttcagactttcctaatgtagaa
gatgctcctggcaacctgcgtttcagttgtgcccaggcggaagttaaacgcctgattgaa
cgcactgcctttgctatggcgcaacaggatgttcgctattacctcaacggtatgctgtgg
gaagttcgccaggatcacttgcgggttgtggctactgacggtcaccgcatggctatgtgc
acccgtgctattgcggtgaatactgacgatgttgtgcaggccattttgccgcgcaaaggt
gtgttggagttatcccgtttgctggatgattcaagcgcgcaagtggaagtggtattgagt
gcgaaccatattcgtgtcacctcggtggattacaccttcacctccaagctggtggatggc
aaattcccggaatacgagcgtgtactgccgcgcggtggcaataaagtagtgattggctcc
cgccttgaactcaagcaggcttttgcccgtaccgcaattctctctaacgagaaatatcgt
ggcgttcgcctgttgttatccaatggtgtattgaccattgtggccaataacccggaacag
gaagaagcggaagaacaggttactgtggattacaccggtgagtctttggagataggtttt
aatgtgagctatctccaggatgttgccaatgtgatcagtaatgagaacatcaaaattacc
ctgcttgatgccaactccagtgccctgttggaagaacctgaaaacagcgattccctctat
gttgttatgccaatgcgtctctaa
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