Callithrix jacchus (white-tufted-ear marmoset): 100389056
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Entry
100389056 CDS
T03264
Symbol
TSEN54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54 isoform X1
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cjc03016
]
100389056 (TSEN54)
Transfer RNA biogenesis [BR:
cjc03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
100389056 (TSEN54)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
100389056
NCBI-ProteinID:
XP_002748826
Ensembl:
ENSCJAG00000014278
UniProt:
F7INL6
LinkDB
All DBs
Position
5:127507526..127517213
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AA seq
530 aa
AA seq
DB search
MEPEREPEPQPAAVEVPAGRVLSARELFAARSRSQKLPQRSHGPKDFLPDGSAAQAERLR
RCREDLWQLLAEQRVERLGSLVAAEWRPEEGFVELKSPAGKFWQTMGFSEQGRQRLHPEE
ALYLLECGSIQLFHQDLPLSIQEAYQLLLTDDTVTFLQYQVFSHLKRLGYVVRRFQPSSV
LFPYERQLNLDGSMQHLEDGDGKRKRSSSSPRSINKKAKALENSLQPENLAASSPPPSSQ
PSQCPEEKPQESSPMKGPGGPFQLLGSLGPSPGLARKGVGCSWENGRAEKGVTGAGKPRW
NFEQISFPNMASDNCHTLLCAPAPELLPANVAGRETDAESWCQKLNQRKEKLSRWEREHH
MEATHFREDVNADPEVQRCSSWREYKELLQRRQLQRDQSQAPHLWGQAVTPLLSPGQASS
PAMVLQHISVLQTTHLADGGAWLPENSGGLEISFDVYQADAVATFRKNNPGKPYARMCIS
GFDEPVPDLCSLKRLSYQSGDVPLIFALVDHGDISFYSFRDFTLPQDVEH
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggagcctgagcgcgagcccgaaccccagccggcggcagtggaggttcctgcgggacgc
gtgctcagcgcccgggagctctttgccgcccgctcgcggtcgcagaagctgccccagcgc
tcgcatggccccaaggactttctgcccgacggctccgcggcccaagccgagcggctgcgc
aggtgccgggaggatctctggcagctgctggcggagcagcgcgtagagcgcctgggcagc
ttggtggctgccgagtggaggccggaagagggcttcgtggagttgaagtctcctgcgggc
aaattctggcagaccatgggcttctcagagcagggccggcagcggcttcacccggaagag
gccttatatctcctggagtgtggctccatccaactcttccaccaagacctgccactgtct
atccaggaagcttaccagctgctgctaaccgatgacactgtgaccttcctgcagtaccag
gtcttcagccacctgaagaggttgggttatgtggttcggcgatttcaaccaagctctgtc
ctgttcccgtatgagaggcagcttaacttggacggcagcatgcagcacctggaggatgga
gatggcaaaagaaagagaagcagctccagccctcggtccattaataagaaggccaaggcc
ctggagaactccctgcaacctgagaatctggcagcctccagcccacctccctccagccag
cccagccaatgcccagaggagaaaccccaggagtcaagccccatgaagggcccaggtggc
ccctttcagcttctggggtccctggggcccagccctggcctggccaggaagggggtgggg
tgcagctgggagaatggcagagctgagaaaggagtcacgggggctggcaagccacgctgg
aacttcgagcagatctccttccccaacatggcttcagacaactgccacaccctcctgtgc
gccccagccccagagctgctcccagccaatgtggctgggcgggagacagatgcagagtca
tggtgccagaagctgaaccagcgcaaggagaagctctccagatgggaacgggagcaccac
atggaggccacgcacttccgggaggatgtcaatgccgatcccgaggtgcagcgctgctct
agctggcgagagtacaaggagctgttgcagcgaaggcagctgcagagggaccagagccag
gcccctcacctgtggggccaggccgtcacacccctgctgagtccaggccaggccagctcc
ccagccatggtccttcagcatatctctgtgctgcagaccacacaccttgctgatggaggt
gcctggctgccggagaattctgggggcttggaaatcagctttgatgtttaccaggcggac
gctgtggccacattccgaaagaataaccctggcaaaccctatgcccggatgtgcattagt
ggatttgatgagcctgtcccagacctctgcagcctcaagcggttgtcttaccagagtggg
gatgtccctctgatctttgccctggtggatcatggtgacatctccttctacagcttcagg
gacttcacattgccccaggatgtggagcactga
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