Callithrix jacchus (white-tufted-ear marmoset): 100412331
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Entry
100412331 CDS
T03264
Symbol
PDGFRA
Name
(RefSeq) platelet-derived growth factor receptor alpha precursor
KO
K04363
platelet-derived growth factor receptor alpha [EC:
2.7.10.1
]
Organism
cjc
Callithrix jacchus (white-tufted-ear marmoset)
Pathway
cjc01521
EGFR tyrosine kinase inhibitor resistance
cjc04010
MAPK signaling pathway
cjc04014
Ras signaling pathway
cjc04015
Rap1 signaling pathway
cjc04020
Calcium signaling pathway
cjc04072
Phospholipase D signaling pathway
cjc04144
Endocytosis
cjc04151
PI3K-Akt signaling pathway
cjc04510
Focal adhesion
cjc04540
Gap junction
cjc04630
JAK-STAT signaling pathway
cjc04810
Regulation of actin cytoskeleton
cjc05163
Human cytomegalovirus infection
cjc05200
Pathways in cancer
cjc05206
MicroRNAs in cancer
cjc05214
Glioma
cjc05215
Prostate cancer
cjc05218
Melanoma
cjc05230
Central carbon metabolism in cancer
cjc05231
Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
cjc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100412331 (PDGFRA)
04014 Ras signaling pathway
100412331 (PDGFRA)
04015 Rap1 signaling pathway
100412331 (PDGFRA)
04630 JAK-STAT signaling pathway
100412331 (PDGFRA)
04020 Calcium signaling pathway
100412331 (PDGFRA)
04072 Phospholipase D signaling pathway
100412331 (PDGFRA)
04151 PI3K-Akt signaling pathway
100412331 (PDGFRA)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100412331 (PDGFRA)
09144 Cellular community - eukaryotes
04510 Focal adhesion
100412331 (PDGFRA)
04540 Gap junction
100412331 (PDGFRA)
09142 Cell motility
04810 Regulation of actin cytoskeleton
100412331 (PDGFRA)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100412331 (PDGFRA)
05206 MicroRNAs in cancer
100412331 (PDGFRA)
05230 Central carbon metabolism in cancer
100412331 (PDGFRA)
05231 Choline metabolism in cancer
100412331 (PDGFRA)
09162 Cancer: specific types
05214 Glioma
100412331 (PDGFRA)
05218 Melanoma
100412331 (PDGFRA)
05215 Prostate cancer
100412331 (PDGFRA)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
100412331 (PDGFRA)
09176 Drug resistance: antineoplastic
01521 EGFR tyrosine kinase inhibitor resistance
100412331 (PDGFRA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cjc01001
]
100412331 (PDGFRA)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
cjc04090
]
100412331 (PDGFRA)
Enzymes [BR:
cjc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
100412331 (PDGFRA)
Protein kinases [BR:
cjc01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
100412331 (PDGFRA)
CD molecules [BR:
cjc04090
]
Proteins
100412331 (PDGFRA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
VEGFR1-3_N_Ig-like
V-set
VEGFR-1-like_Ig-like
Ig_6
Herpes_gE
C2-set_2
DUF3475
Kinase-like
Motif
Other DBs
NCBI-GeneID:
100412331
NCBI-ProteinID:
NP_001257517
Ensembl:
ENSCJAG00000018415
UniProt:
F6VUA7
LinkDB
All DBs
Position
3:complement(138626490..138690202)
Genome browser
AA seq
1089 aa
AA seq
DB search
MGTSHPVFLVLGCLLTGLSLILCQLSLPSVLPNENEKVVQLNSSFSLRCFGESEVSWQYP
MSEEENPNVEIRNEENNSGLFVTVLEVSSASAAHTGLYTCYYNHTQTEENELEGRHIYIY
VPDPDVAFVPLGMTDYLVIVEDDDSAIIPCRTTDPETPVTLHNSEGVVPASYDSRQGFNG
TFTVGPYICEATVEGKKFQTIPFNVYALKATSKLDLEMEALKTVYKSGETIVVTCAVFNN
EVVDLQWTYPGEVKGKGITMLEEIKVPSIKLVYTLTVPEATVKDSGDYECAARQATREVK
EMKKVTISVHEKGFIEIKPNFSQLEAVNLHEVKNFVVEVQAYPTPRISWLKNNLTLIENL
TEITTDVEKIQETRYRSQLKLIRAKEEDSGHYTIVVQNEDDVKSYTFELLTQVPSSILDL
VDDHHGSTGGQTVRCMAEGTPLPDIEWMICKDIKKCNNETSWTILANNVSNIITEVHPRG
RSTVEGRVTFAKVEETIAVRCLAKNLLGAENRELKLVAPTLRSELTVAAAVLVLLVIVII
SLIVLVVIWKQKPRYEIRWRVIESISPDGHEYIYVDPMQLPYDSRWEFPRDGLVLGRVLG
SGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNL
LGACTKSGPIYIITEYCFYGDLVNYLHKNRDSFLSHHPEKAKKELDIFGLNPADESTRSY
VILSFENNGDYMDMKQADTTQYVPMLERKEVSKYSDIQRSLYDRPASYKKKSMLDSEVKN
LLSDDNSEGLTLLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLA
RDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMM
VDSTFYNKIKSGYRMAKPDHATSEVYEIMVKCWNSEPEKRPSFYHLSEIVENLLPGQYKK
SYEKIHLDFLKSDHPAVARMRVDSDNAYIGVTYKNEEDKLKDWEGGLDEQRLSADSGYII
PLPDIDPVPEEEDLGKRNRHSSQTSEESAIETGSSSSTFIKREDETIEDIDMMDDIGIDS
SDLVEDSFL
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atggggacttcccatccggtgttcctggtcctaggctgtcttcttacagggctgagccta
atcctctgccagctttcattaccctctgtccttccaaatgaaaatgaaaaggttgtgcag
ctgaattcatccttttctctgagatgctttggggagagtgaagtgagctggcagtacccc
atgtctgaagaagagaaccccaatgtggaaatcagaaatgaggaaaacaacagtggcctt
tttgtgacggtcttggaagtgagcagcgcctcggcagcccacacagggctgtacacttgc
tattacaaccacactcagacagaagagaatgagcttgaaggcaggcacatttacatctat
gtgccagacccagatgttgcctttgtacctctaggaatgacggattatttagtcattgtg
gaggacgatgattctgccatcataccttgtcgcaccactgatcccgagactcctgtaacc
ttacacaacagtgagggggtggtacctgcctcctatgacagcagacagggctttaatggg
accttcactgtcgggccctatatctgtgaggccactgtcgaagggaaaaagttccagacc
atcccttttaacgtttatgctttaaaagcaacatcaaagctggatctagaaatggaagct
cttaaaaccgtgtataagtcaggggaaacgattgtagtcacctgtgctgtatttaataat
gaggtggttgaccttcagtggacttaccctggagaagtgaaaggcaaaggcatcacaatg
cttgaagaaatcaaagtcccatccatcaaattggtgtacactttgacggtccccgaggcc
acggtgaaagacagtggagattacgaatgtgctgcccgccaggctaccagggaggtcaaa
gaaatgaagaaagtcactatttctgtccatgagaaaggcttcattgagatcaaacccaac
ttcagccagttggaagctgtcaacctgcatgaagtcaaaaattttgtcgtagaggtgcag
gcctacccaactcccaggatatcctggctgaaaaacaacctgactctgattgaaaatctc
accgagatcaccactgatgtagaaaagattcaggaaacaaggtatcgaagccaattaaag
ctaatccgtgctaaggaagaagacagtggccattacactattgtagttcaaaatgaagat
gatgtgaagagctatacttttgaactgttaactcaagttccttcatccattctggacttg
gttgatgatcaccatggctcaactgggggacaaactgtgaggtgcatggctgaaggcacg
ccgcttcctgatattgagtggatgatttgcaaggatattaagaaatgtaataacgaaact
tcctggacaattttggccaacaatgtctcaaacatcatcacggaggtccatccccgaggc
aggagtactgtggagggccgtgtgactttcgccaaggtggaggagaccattgcggtgcga
tgcctggctaagaatctccttggtgctgagaaccgagagctgaagctcgtagctcccacc
ctgcgttctgaactcacggtggctgccgcggtcctggtgctgttggtgattgtgatcatc
tcactcattgttctggtcgtcatttggaaacagaaaccgaggtatgaaattcgctggagg
gtcattgaatcaatcagccctgatggacatgaatatatttacgtggacccgatgcagctg
ccttatgactcaagatgggagtttccaagagatggactagtgcttggtcgggtgttgggg
tctggagcgtttgggaaggtggttgaaggaacagcctatggattaagccgatcccagccg
gtcatgaaggttgccgtgaagatgttaaagcccacggccagatccagtgaaaaacaagct
ctcatgtctgaactgaagataatgactcacctggggccacacttgaacattgtaaacttg
ctgggagcctgtaccaagtcaggccccatctacatcatcacagagtactgcttctatgga
gatttggtaaactatttgcataagaatagggatagcttcctgagccaccacccggagaag
gcaaagaaagaactggatatctttggattgaaccctgctgatgaaagcacacggagctat
gttattttgtcttttgaaaacaatggtgactacatggacatgaagcaagctgatactaca
cagtatgtccccatgctggaaaggaaagaagtttctaaatattccgacatccagagatca
ctctatgatcgtccagcctcatataagaagaaatctatgttagactcagaagtcaaaaac
ctcctttcagatgataactctgaaggcctcactttgttggatttgttgagcttcacctat
caagttgcccgaggaatggagtttttggcttcaaaaaattgtgtccaccgggatctggct
gctcgcaacgtcctcctggcacaaggaaaaattgtgaagatctgtgacttcggcctggcc
agagacatcatgcatgactcgaactacgtgtcaaaaggcagtacctttctgcctgtgaag
tggatggctcctgagagcatctttgacaacctctacaccacactgagtgacgtctggtct
tatggcattctgctctgggagatcttttcccttggtggcaccccttaccccggcatgatg
gtggattctactttctataataagatcaagagtgggtaccggatggccaagcctgaccac
gctaccagtgaagtctacgagatcatggtgaaatgctggaacagcgagccggagaagaga
ccctccttttaccacctgagtgagattgtggagaatctgctgcctggacaatataaaaag
agttatgaaaaaattcacctggacttcctgaagagtgaccatcctgccgtggcacgcatg
cgtgtggactcagacaatgcgtacattggtgtcacctacaaaaacgaggaagataagctg
aaggactgggagggtggcctggatgagcagaggctgagcgctgacagtggctacatcatt
cctctgcctgacatcgaccctgtccctgaggaggaggacctgggcaagaggaacagacac
agctcacagacctctgaagagagtgccattgagacaggttccagcagttcgaccttcatc
aagagagaggatgagaccatcgaagacatcgacatgatggacgacatcggcatagactct
tcagacctggtggaagacagcttcctgtaa
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