Corynebacterium jeikeium: jk1954
Help
Entry
jk1954 CDS
T00255
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cjk
Corynebacterium jeikeium
Brite
KEGG Orthology (KO) [BR:
cjk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cjk03032
]
jk1954 (topA)
03400 DNA repair and recombination proteins [BR:
cjk03400
]
jk1954 (topA)
Enzymes [BR:
cjk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
jk1954 (topA)
DNA replication proteins [BR:
cjk03032
]
Prokaryotic type
DNA Topoisomerases
jk1954 (topA)
DNA repair and recombination proteins [BR:
cjk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
jk1954 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Arabino_trans_N
Motif
Other DBs
NCBI-ProteinID:
CAI38135
UniProt:
Q4JSS2
LinkDB
All DBs
Position
complement(2279837..2282830)
Genome browser
AA seq
997 aa
AA seq
DB search
MANDDVKRLVIVESATKAKKIAPILGPNYIVEASVGHIRDLPRGAADVPAKYKKEPWARL
GVNVDKDFEALYVVSPDKKKKVSDLKAKLKQVDELYLATDPDREGEAIAWHLLEVLKPKV
PVRRMVFHEITKNAILEAAQNTRELDYDLVDAQESRRVLDRLYGYEVSPVLWKKVMPRLS
AGRVQSVATRVIVERERERMKFIAAEYWDLSATFGVVDAVSSSLDDAAPDSFEARLATVA
GKRVAQGRDFGDDGKLKASAKETFVLDGAKAKSLADGLQGQEFTVTAVEEKPYTRRPYPP
FMTSTLQQEAGRKLRFTSERTMRIAQRLYENGHITYMRTDSTTLSTAGIEAARKQAKELY
GAKFVADGPRQYSRKVKNSQEAHEAIRPAGETFQTPGQLSNQLDAEEFKLYELIWQRTVA
SQMADAKGQSMKLTVAGDAKSGETCEFTATGRTLTFPGFLKAYVEVSRTADGRDVADNAE
KRLPQLTKGDELNARDVAADGHSTNPPARYTEASLVKKMEEMGIGRPSTYASIIRTIQDR
GYVLPRGNALVPSWVAFAVIGLLEQNFGALVDYDFTSAMEDELDAIAAGNEDRVNWLKGF
YFGDSSRPDAPGAVVPRLGGLKHIVGDNLEQIDARRVNSLHIFDDENGVPIVVRVGRYGP
YLERIKPVPQGAPEGTEPEVQRANLPESMSPDGLTLEVAEKLFATPQGGRELGTNPANGR
TIVAREGRYGPYVTEVLGEDEESRVAEEAVKVWEAERDEQDREREAEGKKPLSRETKTAQ
AQKEKRVKQIVEETLKPKTASLFSDMEPASVTLEEALKLMSLPREVGVDPSDNEVITAQN
GRYGPYLKKGKDSRSLANEEQIFTITLDEARRIYAEPKRRGRAAAQPPLKQLGDNDVSGK
PMSVKEGRFGAYVTDGTTNASLRKGDTPETMTDARANELLSERRAKQAAEGSAPAKSSRK
AAKKSAKKTTKKAAKKTTKKTAKKPPTLTKRTVKKSR
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacgatgacgtcaagcgtctagtaatcgttgagtcggcgacgaaggccaagaag
atcgccccgatcctggggccgaactacatcgtcgaggcttccgtcgggcacatccgtgac
ctcccccggggcgcggcagacgtaccggccaagtataagaaggagccgtgggcgcgtctg
ggcgtcaacgtcgataaagatttcgaggcgctctacgtcgtcagcccggacaagaagaag
aaggtctccgaccttaaggccaagctgaagcaggttgatgaactgtacctggcgacagac
cccgaccgtgagggtgaggctattgcgtggcatctgcttgaggtgctgaagccgaaggtg
ccggtacgccgcatggtgttccacgagattacgaagaacgccatcctcgaggccgcgcag
aacacccgcgagctcgattacgacctggtcgatgcgcaggaatcccgccgcgtactggat
cgcctgtacggctacgaggtctccccggtgctgtggaagaaggttatgccgcgactatcc
gccggtcgcgtgcagtccgtcgccacccgcgtgatcgtggagcgcgagcgcgagcgtatg
aagttcatcgccgccgagtactgggatctgagcgccacgttcggcgtggtagacgctgtt
tcttcttctcttgatgacgccgccccggactccttcgaagcacggctggcaacggtcgct
ggcaagcgcgtggctcagggccgtgactttggcgacgacggcaagctgaaggccagcgca
aaggaaacattcgtcctggacggggcgaaagcgaagtccctggccgatgggctgcagggg
caggagttcaccgtgaccgcggtggaggaaaagccctacacccgccgcccgtatccgccg
tttatgacctccaccctgcagcaggaggccggccgcaagctccgctttacctcggagcgc
acgatgcgtattgcgcagcgtctgtacgaaaacggccacattacttatatgcgtaccgac
tcgaccaccctgtcgaccgctggtatcgaggccgcacgcaagcaggccaaggaactctac
ggggcgaagttcgtggccgatggcccacgccagtactcccgcaaggtgaagaactcgcag
gaggctcacgaggcgatccgcccggcgggcgagaccttccagacccccggccagctgagc
aatcagctggatgccgaggagttcaagctctacgagctgatttggcagcgcaccgtggcc
tctcagatggccgacgcgaagggccagtccatgaagctcaccgtcgccggtgacgcaaag
tcgggagagacctgcgagttcaccgcaaccggccgcaccctgaccttcccgggctttttg
aaggcatacgtggaggtcagccgcaccgccgacggccgcgacgtggccgataacgcggaa
aagcgcctgccccagctcaccaagggcgacgagctgaacgcacgcgacgtggccgccgac
ggccactcgacgaacccgccggcccgctacaccgaggcctcgctggtgaagaagatggag
gagatgggcattggccgtccgtcgacctacgcttccatcatccgcacgatccaggaccgc
ggctacgtgctgccgcgtggcaacgcgctggtgccctcgtgggtggccttcgccgtcatt
ggcctgctggagcagaacttcggggcgctggtggactacgacttcacctccgcgatggag
gacgagctggatgccatcgccgcgggcaatgaggaccgtgtgaactggctgaagggcttc
tacttcggcgatagctcccgcccggatgccccgggtgcggtcgtgccccgcctgggtggc
ttgaagcacatcgtgggcgacaacctggagcagatcgacgcccgccgggtgaactccctg
cacatcttcgacgatgagaacggtgtgccgatcgtcgtccgcgtgggccgctacggaccc
tacctggagcgcatcaagccggtgccgcaaggggcgccggaaggcaccgagccggaggta
cagcgcgcaaacctgccggaatccatgtccccggacgggctgaccctggaggttgccgag
aagctcttcgccactccacagggcggccgagagctgggcaccaaccccgccaacggacgc
accatcgtcgcccgcgaggggcgttacggcccctacgtcaccgaggtgctcggcgaggac
gaggaatcccgcgtggccgaggaggccgtgaaggtgtgggaggctgagcgcgacgagcag
gatcgcgagcgcgaggccgagggtaagaagccgctcagtcgcgagactaagactgcgcag
gcgcagaaggaaaagcgcgtcaagcagatcgtcgaggagacgctgaagcccaagaccgcc
agcttgttcagcgacatggagccagccagcgtgacgttggaagaggccctgaagctcatg
agcctgccgcgcgaggtgggcgtcgacccaagcgacaacgaggtaatcaccgcccagaac
ggtcgctacggcccctacctcaagaagggcaaggattcccgttcgctggccaacgaagaa
cagatcttcacgattaccctcgacgaagctcgacgtatctacgccgagccgaagcgccgc
ggccgtgcagcagcgcagccgccgttgaagcagctgggcgataacgacgtgtccggcaag
ccgatgtccgtcaaggaaggtcgcttcggcgcctatgtcacggatggcaccaccaatgcc
tccctgcgcaagggcgataccccggagacgatgactgacgcccgcgcgaatgagctgctg
tcggagcggcgcgctaagcaggcagccgaggggtcggcacctgcgaagtccagccgcaag
gctgcgaagaagtcggcgaagaagacgacgaagaaggctgcgaaaaagacgaccaagaag
accgcgaagaagccgccgacgctgaccaagcgcacggtgaagaagtctcgctaa
DBGET
integrated database retrieval system
