Coturnix japonica (Japanese quail): 107314175
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Entry
107314175 CDS
T04297
Symbol
PRPF19
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-processing factor 19
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03040
Spliceosome
cjo04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107314175 (PRPF19)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107314175 (PRPF19)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cjo03041
]
107314175 (PRPF19)
04121 Ubiquitin system [BR:
cjo04121
]
107314175 (PRPF19)
03400 DNA repair and recombination proteins [BR:
cjo03400
]
107314175 (PRPF19)
Enzymes [BR:
cjo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107314175 (PRPF19)
Spliceosome [BR:
cjo03041
]
Complex B
Other components
Prp19 complex
107314175 (PRPF19)
Complex C
Prp19-CDC5 complex
107314175 (PRPF19)
Ubiquitin system [BR:
cjo04121
]
Ubiquitin ligases (E3)
U-box type E3
107314175 (PRPF19)
DNA repair and recombination proteins [BR:
cjo03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
107314175 (PRPF19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Prp19
ANAPC4_WD40
NBCH_WD40
U-box
PROPPIN
Cytochrom_D1
Nup160
eIF2A
Ge1_WD40
RMC1_N
zf-Nse
DUF1830
ATG16
GP3
Cep57_MT_bd
Motif
Other DBs
NCBI-GeneID:
107314175
NCBI-ProteinID:
XP_015718624
LinkDB
All DBs
Position
5:complement(231298..235347)
Genome browser
AA seq
504 aa
AA seq
DB search
MALICSISNEVPEHPCVSPVXNHVYERRLIEKYIAENGTDPVNNQPLSEEQLIDIKVAHP
IRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL
TKEVTAAREALATLKPQAGLIVPQAVPSSQPNVAGAGESMDLGELAGMTPEIIQKLQDKA
TVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKILTG
GADKNVIVFDKSSEQILATLKGHSKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCVQ
VVRAHEGSVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDESSGCALTCAQFHP
DGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWD
LRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQWTEILHFTEHSGLTTG
VAFGHHAKFIASTGMDRSLKFYSL
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggccctcatctgctccatctccaacgaggtccccgagcacccgtgcgtgtcgccggtg
ntcaaccacgtgtacgagcggcggctgatcgagaagtacatcgccgagaacggcaccgac
cccgtcaacaaccagccgttatccgaggagcagctcattgacatcaaagttgcccacccc
atccggcccaagccaccatcagccaccagcatcccggccatcctaaaggcgctgcaggat
gagtgggatgccgtcatgctgcacagcttcacgctgcgccagcagctgcagaccacacgc
caggagctgtcccatgcgctgtaccagcatgatgctgcctgccgtgtcatcgcacggctc
accaaggaggtcactgctgccagggaagctctggccacgctgaaaccacaggctggcctc
atcgtgccgcaggcagtgccatcctcacagcccaacgtggcgggagctggggagtccatg
gacctgggtgagcttgcaggcatgactcctgagattatccagaaacttcaagacaaggcc
actgtgctgaccacggagcgcaagaagagaggcaagacagtgccagaggagctggtgaag
ccagaggagctcagcaagtaccggcaggttgcctcacacgtggggttgcacagtgccagc
atcccggggatcctggccttggatctctgtccttccgacaccaacaagatcctcaccggt
ggggctgataaaaatgtcatcgtctttgacaagagctcggagcagatcctggcaacgctc
aaaggccactccaagaaggtcaccagtgtcgtgttccacccctcacaggatttggtgttc
tcagcttctcctgatgccaccattcggatctggtctgtgcccaacgcttcctgtgtgcag
gttgtccgtgcccacgagggctctgtgacagggctcagcctgcatgccacgggtgattac
cttctgagctcttctgatgatcagtactgggccttctcggacatccagacaggccgtgtt
ctcaccaaggtgacagatgagagctctggttgtgctctcacctgtgcccagttccaccca
gatgggctcatttttggaacgggaacaatggattctcagatcaagatctgggatctgaag
gaacgcaccaacgtggccaacttcccagggcactctggccccatcaccagcattgccttc
tctgagaacggctactacctcgcaacggctgcggacgactcctccgtcaagctctgggac
ttgcgtaaactgaagaacttcaagacgttgcagctggacaataacttcgaggtgaagtct
ctcatcttcgaccagagcggcacctacctagcactgggcggcacagatgtgcagatctac
atctgcaagcagtggacagaaatcctccacttcaccgagcacagtggcctcaccacaggg
gtggcttttggccaccacgccaagttcatcgcctcgacgggcatggaccgcagcctgaag
ttctacagcctgtag
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