Coturnix japonica (Japanese quail): 107315228
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Entry
107315228 CDS
T04297
Symbol
PSMC1
Name
(RefSeq) 26S proteasome regulatory subunit 4 isoform X1
KO
K03062
26S proteasome regulatory subunit T2
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
107315228 (PSMC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
cjo03051
]
107315228 (PSMC1)
Proteasome [BR:
cjo03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
107315228 (PSMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_22
AAA_2
nSTAND3
DUF815
AAA_5
RuvB_N
AAA_16
AAA_25
AAA_28
AAA_14
ATPase
AAA_3
RNA_helicase
IstB_IS21
TIP49
AAA_18
Prot_ATP_ID_OB_N
Mg_chelatase
AAA_11
AAA_33
Parvo_NS1
AAA_7
NACHT
PhoH
AAA_24
NB-ARC
AAA_30
AAA_17
TsaE
ABC_tran
Sigma54_activat
Motif
Other DBs
NCBI-GeneID:
107315228
NCBI-ProteinID:
XP_015720836
LinkDB
All DBs
Position
5:39737273..39742761
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AA seq
367 aa
AA seq
DB search
MEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYV
SILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQ
IQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGS
ELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELL
NQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMT
LADDVTLDELIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQEG
TPEGLYL
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggaatttatcagaaatcaagaacaaatgaaacctttggaagagaaacaggag
gaggaaagatcaaaggtggacgatctgagggggacaccaatgtcagtgggtaccttggag
gagatcattgatgacaaccatgccatcgtgtccacgtcggtgggatcagaacactacgtc
agtattctgtcttttgtggacaaggatttgctagagccgggctgctctgttctgctaaac
cataaggttcacgctgtgattggagtcctgatggatgacacagatcctttagtgaccgtg
atgaaagttgagaaagctcctcaagagacgtatgctgacattggtggccttgacaaccag
attcaggaaatcaaggagtctgtggagcttcccctcacccaccctgagtactatgaagag
atgggtataaaaccacccaaaggcgtcattctgtacggcccccctggcacaggtaaaact
ttactggccaaagcagtagcaaaccaaacgtcagcaaccttcctgagagttgttggttcc
gagctcatccagaagtacttgggtgacggccccaagctggtgcgtgagctgttccgcgtg
gctgaagagcacgcgccatccattgtcttcattgatgagatcgatgccattggtacaaag
aggtacgactcaaattctgggggtgagagggagatccagcgtacaatgctggagctgctg
aaccagctggatgggttcgactctcgtggggatgttaaagtcatcatggccacaaacaga
atagaaactctggatccagctttaattaggccaggacgtatcgacaggaaaatagagttc
cctctgcctgacgagaaaaccaagaaacgcatctttcagattcacaccagcaggatgacg
ctggcagatgacgtgactttggacgagctgattatggcaaaagatgatctcagtggtgca
gatattaaggcgatttgtacagaagctgggttgatggctttgagggaacggcgaatgaag
gtaacaaatgaagacttcaaaaagtctaaagagaacgttctctataagaagcaggaggga
accccagagggactgtatctttaa
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