Coturnix japonica (Japanese quail): 107317390
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Entry
107317390 CDS
T04297
Symbol
ABCA4
Name
(RefSeq) retinal-specific phospholipid-transporting ATPase ABCA4 isoform X1
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
cjo
Coturnix japonica (Japanese quail)
Pathway
cjo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107317390 (ABCA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cjo02000
]
107317390 (ABCA4)
Transporters [BR:
cjo02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
107317390 (ABCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
SRP54
Motif
Other DBs
NCBI-GeneID:
107317390
NCBI-ProteinID:
XP_015725496
LinkDB
All DBs
Position
8:11834765..11898358
Genome browser
AA seq
2332 aa
AA seq
DB search
MSFLRQIRLLLWKNWILRKRQKLRILVELIWPLSLFLVLVWLRKANPLYRQHECHFPNKA
MPSAGTLPWIQGIICNMNNPCFSSPTRGEGPGVVSNYNNSILARVYKDAQELLLEAPEIH
DLGRVWEELIIMTQFMETMRTNPERIAGRGIRILDILKDGETLTSFLLENAGLPDTVVFQ
LVNAQVRPEQFAYGVPNLTLKEIACSQKLLDRFIIFSSRRALPSVHKAMCALSQESLQRV
EDALYANVDLFKLFQLLPSVLDRNSPGADLRSWGRVLSNVSQSVQKLARKQSVQDLLMVL
QPFVQDGMPGSLGHLVSSLSDLFCGYPEGGGSRVLSFNWYEDNNYKAFLGIDSTKKSIYL
YDNTTTPFCNELIQGLESNPLTKIAWSAVKPLLMGKILFAPSSPPVQQIIKNANSTFEEL
ERLRLLTKAWEEVGPQLWHFFQNSLQMNMIRSSLNHSTVRDFLNSQLGAEGLTAEYIINF
LHNGPPGSREKGMVDFDWRNIFSAADQALRLLNQYLECLTLDKFEGYSDESQLTHQALHL
LEENKFWAGVVFPDIDPTQKSLPPHVKYKIRMDIDAVEKTNKIKDRYWDPGPRADPVDDL
RYIWGGFAYLQDMIEHGIIKTQTNTEVALGIYLQQMPYPCFVDDVFMITLNRSFPIFMVL
AWIYSVSMTVKSIVLEKEMRLKEAMKNRGITNGVIWCTWFLDSFFMMAVSTFLLTALIMH
GQVLHYSNPLLFFLFLLTFTTATIMQCFLFSTFFSKANLAAACSGVLYFTLYLPHIVCFV
WQDHMTVTLKILASLLSQVAFGFGTEYLSRYEEQGLGLQWGNIRTSPLEGDEYSFLFSIK
MMLFDAFLYGILSWYLDHVFPGDYGLPQPWYFPLQESYWLGSRNPKAEKTATADEKASES
EGCLDQNAMNEERNESRTKKSEEPEKAEEKNGNQGKKDGKNKQCKHKREKELGEQGKPKT
DVQDKDEMNINTFCEPEPTGLIPGVCIQNLVKIFANRPKPAVDRMNMTFYEGQITAFLGH
NGAGKTTTMSILTGLFPPTSGTVLIGGLDIQTHMDSIRQRLGMCPQYNILFNHLTVEEHI
LFYSQLKGRSRDEAEQELEMMLEDMGLTHKRNEEAQNLSGGMQRKLSVAIAFVGEAKVVV
LDEPTSGVDPYSRRSIWDLLLKYRSGRTIILSTHHMDEADILGDRIAIISQGKLFCSGSP
VFLKNCFGSGFYLTLVRKVKNTRTGRNVSLCSCGSQCSCSCSSCAHNDEEGTQEQELGGD
LNELAEVIHHHVPEAKLIENIGQELVYLLPNKHFKQRSYASLFRELEETLDDLGLSSFGV
SDTPLEEVFLKVTAEADTEVQKSGDIQENDSTPGKISTENKAAEQTPVEINNTSRMPVGT
AGDQNEGKGSLQYKGFQLVHQQFKALIIKRFHHASRSYKDFLTQIVLPASFVLLSLVLTV
IIPPFGEYPALTLDPWIYGQQFTFFSNERPGSEQMVSLTNAFLNKPGFGNRCLKNQPLLN
YPCNNMPTAWNIPAVHPNLSSLLLNQKWSSENPSPSCKCSTDKKLIMLPECPPGAGGLPP
PQRVQHSTEILQDLTHRNISDFLVKTYPILIKGSLKSKYWVNEQRYGGISIGGKLPVLHV
SGDEVVNFLSNLGRMMNVTGGRNSLAAAKEFSNFLKYMETEDNIKVWFNNKGWHAMVSFL
NVANNAVLRANLRTGQAPEEYGITVVNHPLNLTKEQLSEVTVLTTSVDAVVAICVIFAMS
FIPASFVLYLIQERVTKAKHLQFVSGVSPAIYWLTNFMWDIVNYAVSAGLVVVIFIGFKK
KAYTSRTNLPVFVALLLLYGWAVIPMMYPASSFFSVPSTAYVALSCINLFVGINSSAITF
ILELFENNPALLKFNKTLKNVLIVFPHFCLGRGLIDLAINQAVSEVYARFGEEHVSNPFQ
WDFVGKNLVAMAVQGVAFFTLNLLMQHRLLPSRWFTETAESPIIGEDEDVAEERKRILSG
GNKTNILELRELTKIYAGRHKPAVDRLCVGIRPGECFGLLGVNGAGKTTTFSMLTGDIEV
TSGDAVVAGSSILTQISNVHQNMGYCPQFDALDDLLTGREHLYLYARLRGVPAEEIKRVA
EWGIQKLGLPMYADQLAGTYSGGNKRKLSTAIALIGCPPLILLDEPTTGMDPQSRRLLWD
SIVSVLRDGRAVVLTSHSMEECEALCTRLAIMVKGTFKCLGTIQQLKYKFGDGYIVTLKI
KAPKTGLPPDPSRAEQFIRINFPGSLQREKHYNMLQYQICSSSLAKIFRLIISNKENLYI
EEYSVSQTTLDQVFVNFAKQQVEDEEIPLHPRAAGSNRETKVTPASQQQAVA
NT seq
6999 nt
NT seq
+upstream
nt +downstream
nt
atgagcttccttaggcaaatcagacttctactctggaagaactggatcctccgtaaaaga
caaaagcttcgtattctggtggagcttatatggcctctgtcattatttcttgtcctggtc
tggctgaggaaagctaatccactgtatcgccaacatgaatgtcacttcccaaacaaagct
atgccctcagcaggaacattgccctggatacaggggatcatctgtaacatgaacaaccct
tgtttcagcagcccaacccgaggagagggtccaggtgttgtgtccaactacaacaattcc
attcttgcaagagtatataaagatgctcaggagctcttactggaagcccctgaaatccat
gaccttggcagagtctgggaagaactgatcattatgactcagtttatggaaacaatgaga
acaaatcctgaaagaattgcaggaagaggaataagaattctggacattttaaaagatgga
gagactctcacttccttcttattggaaaatgctggcctccctgatacggttgttttccag
cttgttaatgctcaagtgcgacctgaacagtttgcttatggtgtaccaaacttgacactg
aaggaaattgcttgtagtcagaagctcttggaccgctttattattttcagcagccgaaga
gccctcccttctgttcacaaggccatgtgtgctctctcccaggaaagtctacagagagtg
gaagatgccttgtatgcaaatgttgatttgtttaagctatttcagctgcttccctctgtg
ctggacagaaattcaccaggtgctgacctcaggtcctgggggagagtgctatctaatgtt
tcccaatcagtacaaaagctagccaggaagcaaagtgttcaggaccttttaatggttttg
caaccatttgtacaagatggaatgccaggatccttaggccacttggtgagctccctttct
gatcttttctgtggctacccagaaggaggtggatccagagtgctctccttcaactggtat
gaagataacaactacaaagctttcctggggattgattccacaaagaaatccatttatctt
tatgataatacaaccacgcccttttgcaatgagttgattcagggcttggaatccaaccct
ttaaccaagatagcctggagtgctgtgaagccccttctgatgggaaaaatcctctttgct
cccagttcacctcctgtacagcaaatcattaaaaatgcaaactccacttttgaagaactt
gaacgcctcagactgttgaccaaagcttgggaagaagtaggacctcagctgtggcacttc
ttccaaaacagcctgcaaatgaatatgatccgtagctctctgaaccattctacagtgagg
gacttcctgaacagtcagctgggtgctgaaggcttaactgctgaatacattatcaacttt
ctccacaatgggcctccagggagcagggaaaagggaatggtggattttgactggaggaat
atcttcagtgcagcagaccaagctctgcgtcttctgaatcagtatctggagtgcttgacc
ctggataaatttgaaggctatagtgatgaaagccagctgactcatcaagcccttcattta
ctagaggaaaacaaattctgggctggtgtggtttttccagatatagaccctacacaaaaa
agtcttccaccacatgtgaaatacaagattcggatggacatagatgcagtggagaaaaca
aataaaatcaaagataggtattgggatcctggtccgagagctgatcccgtggatgattta
cgttatatctggggaggctttgcatatctccaagatatgattgaacatgggattataaag
acccagaccaacactgaagtggcactaggaatttatcttcagcaaatgccatatccatgt
tttgtggacgatgtctttatgataaccttaaaccgctcctttcccatcttcatggtgctt
gcttggatatattccgtttccatgactgtgaagagtatagtgctagagaaggaaatgcgt
ctaaaggaggccatgaagaacagaggcatcactaatggagtgatttggtgcacctggttc
ctagacagcttcttcatgatggctgtgagcacattcctcctcacagcactgattatgcat
ggccaagtcctgcattatagcaatccgcttctcttcttcctgttcctgctgacattcact
acagccaccataatgcagtgtttcttgttcagcacctttttctccaaagcaaatctggca
gctgcgtgcagtggtgtcctgtacttcaccttgtacctgcctcacattgtctgctttgtc
tggcaagatcacatgactgttactctgaagatcctagcaagtttgctttctcaagtagct
tttggttttggtacagaatacttgtcacgctatgaagagcaaggtcttggcctacagtgg
ggtaacatcagaactagtcccttggaaggagatgaatatagttttctgttttccattaaa
atgatgctttttgatgcttttctgtatggaatactttcttggtaccttgatcacgttttt
ccaggggactacggcctaccacagccttggtatttccctttgcaggagtcttactggctt
ggttctagaaaccccaaagctgaaaaaacagcaacagctgatgaaaaagcttcagaatca
gaaggttgcttggatcagaacgccatgaatgaggaaaggaatgaaagcagaacaaaaaaa
tctgaagaacctgaaaaggcagaagaaaagaatggcaaccaggggaagaaggatggtaaa
aacaaacaatgtaaacacaaacgagaaaaagaactcggcgagcaggggaagcctaagaca
gatgtccaggacaaagatgaaatgaatataaataccttctgtgaacctgagcctacagga
ctgattccaggagtatgcattcagaatctggtgaagatttttgcaaataggcctaagcca
gcagtagatagaatgaatatgactttttatgaaggccagatcaccgccttccttggtcac
aatggagcaggaaagacaaccaccatgtcgatactgacaggcctcttcccacctacctct
ggaactgtgctgattggtggcctggatattcaaactcacatggattccattcgacaaaga
ctaggaatgtgccctcagtacaacatcctgtttaatcacctaactgtagaggagcacatc
ttgttttactcccaactgaaggggagatccagggatgaagctgagcaagaactggaaatg
atgctagaagacatgggcctcactcataaaaggaatgaagaagctcagaatttgtcaggt
ggaatgcaaaggaaactctctgttgccattgcttttgttggtgaagcgaaagtggtggtc
ctggatgagcccacttctggagttgacccatattctaggcgatctatctgggatcttctg
ctgaagtaccgctcaggcagaaccatcatcctctcaacccatcacatggatgaggcagac
atcctgggagaccggattgccatcatatcccaagggaaactcttctgctcaggctctcct
gtattcctaaagaactgctttggatctggcttttacctcaccctggttcgcaaggtgaag
aacaccagaactggaaggaatgtatcactttgtagctgtggatctcagtgctcctgctcc
tgttccagctgcgcacacaatgacgaagaaggaactcaagagcaggaactaggtggagat
ttgaatgaactagcagaagtaattcatcatcatgtcccagaagcaaaattaattgaaaat
atcggtcaagaacttgtttaccttttacccaataaacactttaaacagcgatcttatgcc
agtctcttcagagaactggaggaaacattggatgacctgggacttagcagttttggagtt
tcagacacaccgcttgaagaggttttcctgaaggtcacagcagaagctgacactgaagtg
caaaaatcaggagacattcaagaaaatgattctactcctggcaaaatttctactgagaac
aaagcagctgaacagaccccagtggaaatcaacaacacttctcgaatgccagtaggcaca
gcaggggatcaaaatgaaggcaaagggtccctgcaatataaaggttttcagcttgtacat
cagcagttcaaagcactgatcatcaaacggttccaccatgcctcccgcagctacaaggac
ttcctaactcagattgttctgcctgccagttttgtgttgctgtctttagtgcttacagtc
attattcctccatttggagaatatcctgccttaactttagacccttggatctatggacaa
cagtttactttcttcagcaatgagcgtcccggcagtgagcagatggtctccctcactaat
gctttcttaaataaacctggatttggaaatcgctgcttgaagaatcagcctcttctgaac
tacccatgtaataatatgcctactgcctggaatatacctgctgttcatcctaatctcagc
agcctcctgctgaatcagaagtggagctctgagaatccttcgccttcctgcaagtgcagc
actgacaagaaactcattatgctgccagaatgccctccaggagctggaggcctcccacca
ccacagagagtgcagcacagcacagaaatacttcaggatctgactcacagaaatatctca
gattttcttgtgaaaacatatcccattttgataaaagggagcttgaagagcaaatactgg
gtcaatgagcaaaggtatggaggaatttctataggaggaaagcttcccgtccttcatgtt
tctggagatgaagttgtcaattttttaagtaatctgggccgaatgatgaatgtcacagga
ggacgaaattcactggctgctgctaaagaattttctaatttccttaaatacatggaaact
gaagataatattaaggtgtggtttaacaataaaggatggcacgctatggttagtttcctt
aatgtagcaaataatgcagtccttagagctaatctgcggactggccaagcccctgaggaa
tatgggatcactgttgtaaaccatcctctgaacctcactaaggaacagctctctgaagtc
actgtgttgaccacctcagtggatgctgttgttgccatctgtgtgatttttgccatgtcc
tttattccagctagttttgttttatacttgattcaagaacgtgtgacaaaagccaagcac
ctccagtttgttagtggtgttagccctgctatctactggctaactaacttcatgtgggac
atagtgaattacgcagtgagtgctggattggttgtggttatattcattggattcaagaag
aaagcatatacttctcggaccaatctccctgtgtttgttgccttgctgcttctgtatggg
tgggcagtaattcccatgatgtaccctgcttcttctttcttcagtgtccctagcactgca
tacgttgcattgtcttgcattaatctctttgtggggatcaacagcagtgccattacattc
atcctggagctatttgaaaataacccagctttgctgaaatttaataaaactttgaaaaat
gtgctgattgtcttcccacacttttgcctgggtcgtggcctcattgacttggccataaac
caagctgtgagtgaagtgtatgccaggtttggtgaggagcatgtttccaatccttttcag
tgggactttgttgggaagaacctggttgccatggctgttcaaggagttgcattcttcact
ctgaatctccttatgcagcaccgattattgccctcaagatggtttactgagactgccgag
tcacctattattggtgaagatgaggatgttgcagaagaaagaaaaagaattctgagtggg
gggaacaaaacaaatatcttagaattacgggaattgaccaagatttatgcaggtaggcat
aagccagcagtggacagactctgtgttggcatccgtcctggagagtgctttggtcttttg
ggagtgaatggtgctggcaaaacaacaacattcagcatgctgactggagacattgaagtg
acatctggagatgctgttgtggctggcagtagtatattgacccaaatctctaatgttcat
caaaacatgggatactgccctcagtttgatgcccttgatgacctactcacaggacgagaa
catctctatctatatgctcgcttgcggggtgttccagcagaggaaatcaagagggttgct
gaatggggcatccagaagttgggacttcctatgtatgctgaccagctggctggtacctac
agtggtggcaacaagcgcaagctctccactgccattgcactgataggctgccctccactc
atcttgctagatgaaccaactactggaatggaccctcagtcccggcgcctcttgtgggat
tctattgtgagtgtgctcagagatggacgagctgtagttctaacttcacacagtatggaa
gaatgtgaagctctgtgtactcgtttagccatcatggtgaaaggtaccttcaaatgcctg
ggcacaattcagcagctaaaatacaagtttggagatggctacattgtcactctgaaaatc
aaggctcctaagactgggctgcctccagatccaagtcgtgctgaacagttcatacgcata
aacttcccagggagtttacagagagagaaacactacaacatgctgcagtatcaaatttgc
tcctcttctctggctaagatttttcggttaataatctccaataaggaaaacttgtatatt
gaagaatattctgtctctcaaactacattagatcaggtttttgtgaactttgctaagcag
caggtggaggacgaggaaattcctttgcatcctcgtgcagctggatccaaccgagaaaca
aaggtgacccctgcctcacagcagcaggcagttgcatag
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integrated database retrieval system
