Coturnix japonica (Japanese quail): 107324409
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Entry
107324409 CDS
T04297
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
cjo
Coturnix japonica (Japanese quail)
Brite
KEGG Orthology (KO) [BR:
cjo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cjo04131
]
107324409 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cjo04147
]
107324409 (COPA)
Membrane trafficking [BR:
cjo04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
107324409 (COPA)
Exosome [BR:
cjo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107324409 (COPA)
Exosomal proteins of bladder cancer cells
107324409 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
Coatomer_WDAD
WD40
ANAPC4_WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
107324409
NCBI-ProteinID:
XP_015739873
UniProt:
A0A8C2TQB9
LinkDB
All DBs
Position
25:859146..875273
Genome browser
AA seq
1224 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLYYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSILIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHAIMICNRKLESLCNIHENIRVKSGAWDESGV
FIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFK
LALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEI
ALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDRLSFLYLITGNLEKLRKMM
KIAEIRKDMSGHYQNALYLGDVAERVRILKNCGQKSLAYLTAATHGLDEEAENLKETFDP
EKETIPDIDPNAKLLQPPAPVMPLDTNWPLLTVSKGFFEGTIASKGKGGALAADIDIDNV
GTEGWGEDAELQLDEDGFVDAGEGFGEEGLGKGQEEGGGWEVEEDLDLPPELDVPAGPAG
GAEDGFFVPPTKGTSPAQVWCNNSQLPVDHILAGSFETAMRLLHDQVGVTNFGPYKQLFL
QTYARGRTTYQALPCLPTMYGYPHRNWKEAGIKNALPAVGLKLNDLIQRLQLCYQLTTAG
KFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLIAICREYIVGLSMEIERKKLPKETLEH
QKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQ
TRKILSACEKNPTDTYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYSPEFQGQI
CRVTTVTEIGKDVIGLRISPLQFR
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgttgactaagttcgagaccaaatcggctcgggtgaaagggctcagcttccaccctaag
aggccttggatcctcaccagccttcataatggcgtcatccagctgtgggattatcggatg
tgtacccttatagacaagttcgacgagcacgatgggcccgttcgagggattgatttccat
aagcagcagcctctgtttgtttctggaggtgatgactataagataaaggtctggaattac
aagctacgccgctgtcttttcactttgcttgggcatttggactacatccgtaccaccttc
tttcatcacgaatatccgtggatcttgagtgcttctgatgatcagaccattcgcgtttgg
aactggcagtccagaacatgcgtctgtgtgctgacaggacacaaccactatgtgatgtgt
gcccagtttcacccctctgaggacctggtagtgtcagccagcttggatcagactgtacgc
gtttgggatatttctggcttaaggaagaagaacctgtcccctggagctgtggagtcggat
gtcaggggaataactggggtggatttgtttgggacaacagatgcagttgtgaagcacgtt
cttgagggccacgatcgtggagtgaactgggccgccttccatcccacaatgccactgatt
gtgtcaggagctgatgatcggcaagtgaagatctggaggatgaatgaatcaaaggcctgg
gaagttgatacttgccgagggcattacaacaatgtctcctgtgctgtctttcaccctcgg
caggagctgatcctcagcaattcggaagacaaaagcatccgtgtctgggatatgtcaaaa
cgcacgggtgtccagaccttccgccgtgatcacgatcgcttttgggtattggctgctcat
cccaatctcaacctctttgctgcaggccacgatggtggcatgattgtgttcaaactggag
cgtgagcgtcctgcttatgcagtacatgggaatatgctgtattatgtgaaggaccgattc
ctccgccaactcgactttaacagctcaaaagatgttgctgtcatgcagctgcgcagtggt
tccaagttccccgtgttcaacatgtcatacaacccagctgagaatgctgtccttctctgc
acaagagcaagcaacttggagaatagcacttatgacctatataccattcccaaggatgca
gactcccagaatccagatgcccctgaagggaagcgctcctccgggctgacagctgtgtgg
gtagctcgtaaccgctttgcagtcctggatcgcatgcattcgatcctcatcaaaaacttg
aagaacgagattacaaagaaggttcaggtgccgaactgcgatgagattttctatgctggc
acagggaatctgttactgagagatgcagactccatcaccctctttgacgtgcagcagaag
cggactctggcctcggtgaagatctccaaggtgaaatatgtcatctggtcagctgacatg
tcccacgtagctctgttggctaagcatgccatcatgatctgcaacagaaagctggaatca
ctgtgcaacatccatgaaaacatccgtgttaagagtggtgcctgggatgaaagtggtgtt
ttcatctataccaccagcaaccacatcaaatacgctgtcaccacaggggatcatggcatc
atccgtaccctggacctgcctatctatgttactcgtgtgaaggggaacaatgtgtactgc
ctggacagagaatgtcgccccagggtcctcaccatcgatcccacagagttcaaattcaag
ctggcattgatcaacagaaagtatgatgaggtgctacacatggtgaggaatgcaaagctt
gtgggccagtccatcattgcctacttgcagaagaagggttaccctgaggtggccctgcac
tttgtcaaggatgagaagacccgtttcagtctggcactggagtgtggcaacattgagatt
gccctggaagcagccaaggctctggatgacaagaattgctgggagaaactgggagaagtg
gcactactgcaaggaaatcatcagattgtggagatgtgttaccagcgcaccaagaacttt
gataggctctccttcctctatcttattactggcaacttggagaagcttcggaagatgatg
aagatagctgagatccgtaaagatatgagtggccactaccagaatgccttgtatctagga
gatgtggcagagagagtgaggatcctgaagaactgtggacaaaagtccctggcctatctc
acagctgcaactcatggcctggatgaggaagctgaaaacctgaaggaaacatttgatcct
gagaaggaaacgattccagacatcgatcccaatgcaaaactactgcagcctcctgctcct
gttatgcctctagatacaaactggccgttgctgactgtctccaaggggttctttgaaggc
acaattgctagcaaaggtaaagggggtgccttggctgctgacattgatatcgacaatgtt
ggcaccgaaggctggggagaagatgcagaattacagctcgatgaagatggctttgtggat
gctggagaaggctttggagaggaaggtctgggtaaaggacaggaagaaggaggtggatgg
gaagttgaagaagatttggatcttcctcctgaactggatgttcctgctggtccagcagga
ggagcagaagatggtttctttgtgccacccaccaagggcaccagcccagctcaggtgtgg
tgtaacaattcacagcttcctgttgaccacattctggcaggttcctttgagacagcaatg
agactcctccatgaccaggtgggagtaacgaactttggaccctacaagcagctgttcctg
cagacttacgcccgtggccgtacaacctaccaagccctgccatgtctccctaccatgtat
ggctacccacatcgcaactggaaagaagctggcataaaaaatgccctcccagctgttggg
ctgaagctcaatgacctgatccagcgcttgcagctgtgttaccagctcacaacagctggc
aagtttgaagaggctgtggagaagttccgctccatcttgctgagtgtgcccttgctggtg
gtggacaataagcaggagattgctgaggcccagcagctgatagccatttgtcgggagtat
atcgtagggctctcaatggagatcgaacggaagaaactgcctaaggagaccctggaacac
cagaagcgaatctgtgagatggctgcctatttcacccactccaacctacagcctgtccac
atgatcctggtactgcgcactgctctcaacctcttcttcaaactcaaaaacttcaagaca
gctgctacttttgctcgtcgtctgctggagctggggccaaagcctgaggtggcccagcag
acccgcaagatcttgtcggcatgcgagaagaatcccactgacacctaccagctcaactat
gacatgcacaacccctttgacatctgtgctgcctcttaccgacccatctatcgtggcaag
cctgtggagaagtgtccactcagtggagcttgctacagccctgagttccaggggcagatc
tgtcgtgtcacaacagtgacagagattggcaaagatgtcattgggctgcggatcagcccc
ctccagttccgctga
DBGET
integrated database retrieval system
